KEGG   Papaver somniferum (opium poppy): 113283245
Entry
113283245         CDS       T05758                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03020  RNA polymerase
psom03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113283245
  09124 Replication and repair
   03420 Nucleotide excision repair
    113283245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psom03021]
    113283245
   03400 DNA repair and recombination proteins [BR:psom03400]
    113283245
Transcription machinery [BR:psom03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     113283245
  RNA polymerase III system
   RNA polymerase III
     113283245
  RNA polymerase I system
   RNA polymerase I
     113283245
DNA repair and recombination proteins [BR:psom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113283245
SSDB
Motif
Pfam: RNA_pol_Rpb8 O-ag_pol_Wzy
Other DBs
NCBI-GeneID: 113283245
NCBI-ProteinID: XP_026388228
LinkDB
Position
5:153197424..153200262
AA seq 145 aa
MVELLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVL
ASTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLM
LLKGDPSNAANFELDQRLFLLMRKV
NT seq 438 nt   +upstreamnt  +downstreamnt
atggttgaactactgtttgaggatatcttcactgtaaacaatatggaccctgatggcaaa
aagtttgataaagtttctcggattgaagcacggagtgagcaatttgacatgttcatgcat
ctagatgtgaacacagaggtatatccccttcgtaccggggacaagttcacaatggtgtta
gcttctaccctaagcttagatggaactcctgacactggttattttactcagggaggaagg
aaatcgcttgcagacaaatttgagtatgtgatgcatgggaagctgtacaggattggcgag
gaaggttcaggaatcaatgttaaagcggagatttatgcttcttttggtggccttcttatg
ttgctcaagggagacccttccaatgctgcaaatttcgagttagatcaaaggctgtttctt
ttaatgaggaaagtttga

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