Papaver somniferum (opium poppy): 113283257
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Entry
113283257 CDS
T05758
Name
(RefSeq) vacuolar protein sorting-associated protein 9A-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113283257
Membrane trafficking [BR:
psom04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113283257
Protein recycling
Other Rab GTPase associated proteins
113283257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
DUF4688
Motif
Other DBs
NCBI-GeneID:
113283257
NCBI-ProteinID:
XP_026388242
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All DBs
Position
5:complement(153674270..153678110)
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AA seq
478 aa
AA seq
DB search
MENADVFGSSTAPLTWHDFLERMRHPSASDFVKSIKSFIVSFSNNASDPERDSAAVQEFL
ANMEGAFRAHSLWAGCAEEELESAGEGLEKYVMTKLFPRVFASLEEDVKFDEQLFEKMAL
LQQFIRPESLDIKPTFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVINNLLHNAS
VASNENPPGADEFLPVLIFVTIKANPPQLHSNLLYIQRYRSQSRLVSEAAYFFTNMLSAE
SFISNIDANAISMDEAEFENNMESARAVLSGLADDPEVSSHSNRDFSRSSRTESLDSKQS
SSNKERNNLLSAMLYRPSPQISPEKLEAQDSKDKMVKKPSISDLEQTGASELLKEDQMST
AFQDYPYLYAQVGDLTINDVDGLLNSYKQLVLKYVCLSKGMSVTSPPPPLPTSQIQTQIS
NETDNQSEDSRPVEKDEEKQEDMAKKDEGPVLQAASSESSITEDESSAGQQDAEKENT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgcggatgtcttcggttcttcgacggctccccttacttggcatgattttctt
gagcggatgaggcatccatccgcctctgattttgtcaaatccattaaaagcttcattgtt
tccttctcaaacaatgcttcggatccggagagagatagtgctgctgtgcaggagtttctt
gcaaacatggaaggtgcatttagggctcattctctttgggctggttgcgcggaggaagag
ctagaaagtgctggtgagggattggagaagtatgtcatgactaaattatttcctcgtgta
ttcgcatcacttgaggaagatgtaaagtttgatgagcaactatttgagaagatggcttta
ctacaacagttcattcggccggagagtttggatataaagccaacgttccaaaatgaaaca
tcatggctgcttgctcaaaaagagttacagaagatcaatatgtacaaggcaccaagagat
aaattggtttgtatcctcaattgttgcaaggtcatcaacaacttacttcacaatgcttca
gttgcttcaaatgagaatcctcctggagctgatgagttccttcctgtcttaatttttgtc
accataaaggctaatcctccacaattgcattcaaacttgctatatatacaaagatacagg
tctcaatcgcgactagtctcagaagcagcttactttttcacaaacatgctttctgcagag
tctttcatatcaaacattgatgccaatgccatctcaatggatgaagccgagtttgaaaat
aatatggaatctgctcgtgcagttctatcaggccttgctgatgatcccgaagtttcaagt
catagtaaccgagatttcagtcgttcatcgagaacagaatcgttggattccaaacaaagt
tcctcaaacaaggaaaggaataacttgctgtctgcaatgctctatcgtccttcaccccag
atatctccagaaaaactcgaggctcaagattctaaagacaaaatggtgaaaaagccctcc
atttcagatttggagcagacaggtgcatctgagcttttgaaggaggatcaaatgagcact
gccttccaagattatccttacctttatgcacaagttggggatttgacgattaatgacgtg
gatggcctgctcaacagttacaaacaactcgtactgaaatatgtttgtctttctaaagga
atgtctgttacttctccgccccctcctttgcctacatcacaaattcaaacacaaatctcc
aacgaaactgacaaccaatcagaagacagtagaccagttgagaaagatgaagaaaagcag
gaagacatggctaaaaaagatgaaggtccagttttacaggcggcaagttccgaatccagt
attacagaagatgaatcatcagctgggcaacaagatgctgaaaaggaaaatacatag
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