Papaver somniferum (opium poppy): 113283271
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Entry
113283271 CDS
T05758
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
KO
K03267
peptide chain release factor subunit 3
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113283271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113283271
03012 Translation factors [BR:
psom03012
]
113283271
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113283271
Translation factors [BR:
psom03012
]
Eukaryotic type
Release factors
113283271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
G-alpha
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
113283271
NCBI-ProteinID:
XP_026388263
LinkDB
All DBs
Position
5:154503359..154510703
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AA seq
513 aa
AA seq
DB search
MNIEDEIQKSIQSLELDSADDNNGEIAAPEEMKSEEVETHDKMEEDDVKEEVHSSDQHLH
SEPTVKDEEMPSPEKAKEVEEKEEQTKRHLNVVFIGHVDAGKSTAGGQILFLSGQVDDRT
IQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETENTRFTILDAPGHKSY
VPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVLLAKTLGVSKLLVVVNKMDDP
TVQWSKERYTEIESKMIPFLKSSGYNVKKDVQFLPISALLGSNMQTRLDKSICPWWDGPC
LFEVMDVIEVPLRDPKGPVRMPIIDKFKDMGTVVMGKIESGSIREGDNLVVLPNKAHVKV
LAVYCDENKVRRAAPGENVRVKLSGIEEEDILEGFVLCSTANPITAVTEFNAQLQILELL
DNAIFTAGYKAVLHVHSAVEECEIVELLAQIDPKTKKPMKKKILFVKNGAVVLCRIQVSN
LICVEKFSDFPQLGRFTLRTEGKTVAVGKIISM
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgaagacgaaatccaaaaaagcatccagtccttggagttggactccgcagat
gataacaatggagaaatcgctgctcctgaagaaatgaaatctgaagaagttgagacacat
gataaaatggaggaagatgatgtcaaggaagaggtccactcaagtgatcaacatttgcac
tcagagcctactgttaaagacgaggaaatgcctagtccagaaaaagctaaagaggtagaa
gagaaggaagaacagacaaagcggcacttgaatgtcgtttttattggtcatgttgatgcc
ggtaagtccacagctggtgggcaaattctttttctcagtggtcaggtggatgatcgaaca
atacaaaaatatgagaaggaagccaaggataagagtcgtgaaagctggtacatggcatat
ataatggacacaaatgaggaagagcgtgtaaaggggaagacagtggaggttggtagagca
catttcgagacggaaaacacgaggttcacaatcctggatgccccgggtcacaaaagctat
gtcccgaatatgatcagtggagcctctcaagcggatataggggtgttggtaatttctgct
cggaaaggagagtttgaaactggatatgaaagaggtggacaaacccgagagcatgtctta
cttgccaaaaccttgggtgtttccaagttgctcgttgtagtaaacaaaatggacgatcca
actgtgcagtggtccaaagagaggtacactgaaatagaatcaaagatgatacctttcctt
aaatcttcgggttacaatgtgaaaaaagatgttcaatttcttcccatttctgctctgctt
ggttcaaacatgcaaacacgtttggataagagtatttgcccttggtgggatggaccatgt
ctttttgaggttatggatgttattgaagttcctctgagagatcctaagggtccagtcagg
atgccaattattgacaagtttaaggacatgggaactgttgttatgggcaaaattgaatct
ggcagtatcagggagggagataatttagtggttcttcccaataaggctcatgttaaagtg
cttgctgtatattgtgatgaaaacaaagtaagacgtgctgctcctggtgaaaatgtacgt
gttaaattatctgggattgaagaggaagacatattggagggttttgtgttatgtagtact
gcaaatccaataactgcagttaccgagttcaatgcccaactgcaaatcctggaattgctc
gataatgctattttcactgcaggttacaaggcagttttacatgttcattctgctgttgag
gagtgtgaaattgttgagctactagcacaaatcgaccctaagactaagaaacccatgaaa
aagaagattctttttgtaaagaatggtgctgtggttctatgccggattcaggttagtaac
ttgatatgtgtagagaagttctcagattttccgcagcttgggcgatttaccttgcgtact
gaaggaaaaacagtggcagtggggaaaattattagcatgtag
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