Papaver somniferum (opium poppy): 113283383
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Entry
113283383 CDS
T05758
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03440
Homologous recombination
psom03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113283383
03460 Fanconi anemia pathway
113283383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psom03032
]
113283383
03400 DNA repair and recombination proteins [BR:
psom03400
]
113283383
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113283383
DNA replication proteins [BR:
psom03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
113283383
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
113283383
Bloom's syndrome complex (BTR)
113283383
FA (Fanconi anemia) pathway
113283383
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
HRDC
ResIII
HHH
Cob_adeno_trans
HEPN_MAE_28990
Motif
Other DBs
NCBI-GeneID:
113283383
NCBI-ProteinID:
XP_026388401
LinkDB
All DBs
Position
5:complement(159221615..159232595)
Genome browser
AA seq
1248 aa
AA seq
DB search
MATTQMSVSGRNLSIDTKSSEKSPKINWAQHASAHDGFASQNKFLSSTFLYSLPTQKPSS
EGIPCESRSMASAVVDPQRQHDPQIKKAWHTLSSLKETCRIYLKPGITSPLVHRNGAEKL
PSTMVYPSHDTTKKATVWSSSDMSRRSSESSTHEEVQNHPKFINSSSRVGEPVKNTSSSL
PERRVNAAENFRGTNMGMPHGREESMMYNSPAAVCNGSTDQGLVAEFADGFDDDEIFQTL
DVDQIVQEHIQLTCTPQSSMSKLPPFTPVVNKDSYTSYEGACLPPELSIDCDHGVKVAHC
PEAASHLQEKKDLLISISNELLDNGDELSPPQLEKLRQDRVQLKEEVKLLEKYLQSSSVN
EERQKSHSLASTAAHRSFQPETPLSTFRIDPLRFDAQVQIRAEQNSYISGSQSSISFSCH
DRFATPGPVEREAYTPKIFDVKYIDGSNDKRWSSSNFPWSKELEADNRRVFGNRSFRPNQ
REVINATMSGCDVFVLMPTGGGKSLTYQLPALVSDGITLVISPLVSLIQDQIMHLLQANI
PAAYLSANMEWTEQQEIFRELSSGCCKYKLLYVTPEKVAKSDALLRQLESLHARQSLSRI
VVDEAHCVSQWGHDFRPDYQSLGILKQKFPSTPVLALTATATASVKEDVVQALGLVNCIV
FTQSFNRPNLWYSTVPKTKKCMEDIHKFIKENHFDECGIIYCLSRLDCEKVAEKLQECGH
KASFYHGSMDPHQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYH
QECGRAGRDGQRSSCVLYYSYSDYIRVKHMISQGVTEPSPFAAGSRRSNPERMLETNIEN
LQRMVSYCENDVDCRRFLQLIHFGEKFDSATCNKTCDNCSKNLSHIDKDVTDIANQLVEL
VKSTGQQNSSSHILEVFRGSMSQIVKRYRHDTVKLHGSGKHLGKGEASRILRHLVTEDVL
VEEVKKSDIYGSVSSVLKVNDSKFYDISCGGKKIILRFPTSTKTVKAAVTKGPLASSGKM
SNKQYETPVEKPYETPDEKPQSEAEQLLSATVYGALRLLRTNLIREAAEGGVNLAAHHIF
ANNVLHNLSKAIPRTKEELLEVNGIGRAKLAKYGDRVLEAIDITVNGFHSKDKSNNSSGS
DKRRRNLTGTTNSGFIEDDDDFTDSTGSLKKRASDEAMNRNTEYNDFDAARYDQCIDIDL
DWEDLNDDGNINGSNANNELGRVLPSWAAGNKSQTQGRNLYQEFAYKG
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggctactacgcaaatgtcagttagtgggaggaacttgagtatagatactaaatcctct
gagaaatctccaaagatcaactgggcgcaacacgctagtgcacatgatggtttcgcaagt
caaaataagtttttgagctcaactttcctttactcgttaccaacacagaaacctagttct
gaaggaataccatgtgaaagcaggtcgatggcttctgcagttgtagatcctcaaaggcag
catgatccacaaattaaaaaggcttggcatactctttctagccttaaggagacatgcagg
atttatttaaaacctggaataacttcacctttagttcataggaatggtgcagagaaattg
ccatccacaatggtatatccttctcatgatacgacaaagaaagctaccgtatggagttca
tctgacatgtcacgaagatcttctgaaagttccactcatgaagaagttcagaatcatcct
aaattcatcaattccagttctagagttggtgaacctgtaaaaaacacgagttcttctttg
ccagaaagaagggtgaatgctgcagaaaatttcagaggtacaaacatgggaatgccacat
gggagagaagaatcaatgatgtataactctccagctgccgtttgtaatggatctactgat
caggggttagttgcagaatttgctgatggttttgatgatgatgaaatctttcagactctt
gatgtagatcaaatcgttcaggagcacatccaattaacttgcacacctcaatcatcaatg
tctaagctccctccattcaccccagttgtaaataaagatagttatacaagttatgaagga
gcatgtttgccgccagaattatccattgactgtgatcatggggtgaaggtagcacattgc
ccagaagctgcatctcatttgcaggagaagaaggatttactaatttccatttcgaatgag
cttcttgacaatggagatgagttaagcccgccacagttagagaagcttcgtcaggatagg
gtgcagttgaaagaagaagttaagctgcttgagaaatatctccagtcttcatcagtgaat
gaagagagacagaaatcacattctttagcatccaccgctgcacacaggagttttcaacct
gaaacacctttgagcacattcaggattgatcctctgagatttgatgctcaagtccagata
cgtgctgaacaaaacagctacatcagtgggtcgcagtcatccatatcattctcttgtcat
gataggtttgccacaccaggccctgtggaaagggaagcatatactccaaaaatctttgat
gttaaatacattgatggatcgaatgacaagagatggagcagtagtaactttccatggtcc
aaagagctggaggccgataacaggagagtattcgggaatcgttcctttcgccccaatcaa
agagaggtgataaatgcaacaatgagtggttgtgatgtttttgttttgatgccgactgga
ggtggaaagagcttgacataccagcttcctgctcttgtatctgatggaattaccttagtg
atttcacctcttgtctcgctcattcaagatcaaatcatgcatctgctccaggcaaatatc
cctgctgcatacttgagtgccaatatggagtggaccgagcagcaagagatatttagagaa
ttgagctctggttgctgtaaatacaagttattatatgtcaccccagagaaagttgctaag
agtgatgctttattgagacaattggaaagtttgcatgcccgtcaatctctttcaaggatt
gttgtggatgaagctcattgtgtaagccaatggggacatgatttcagaccggactatcag
agccttggtattttgaaacaaaagttcccaagtactccggttttggctttaactgctact
gcaactgcaagtgtcaaagaagacgttgtgcaagctcttggtctcgtgaattgcattgtt
tttacgcaaagtttcaatcgtccgaatttgtggtactccacggtcccaaagacaaaaaaa
tgtatggaggacattcacaagttcatcaaagagaatcatttcgatgaatgtggcatcatc
tattgtctttccagacttgactgtgagaaagttgctgaaaagttacaggaatgtggtcac
aaagcatcattctaccatggtagcatggaccctcaccagcgagcatttgttcaaaagcag
tggagcaaagatgagatcaatatcatatgtgcaacggtagcatttggaatgggtatcaac
aaacctgatgtccgctttgtcatccatcattcacttcccaaatcaattgaaggttaccat
caggaatgtggccgtgctggtagagatggtcaacggtcatcttgcgtattatattacagc
tacagtgattatattcgagttaagcatatgattagccaaggagtcacggagccaagtccg
tttgcagctggatctagacgatctaatcctgagaggatgttagaaacaaatattgagaat
cttcagcgaatggttagctattgtgaaaatgatgttgattgccgacgtttcctacaactt
attcattttggggaaaaatttgattctgcaacgtgtaataaaacttgtgataactgttcc
aagaatttaagtcatattgacaaggatgttacagatatagcgaatcagctggttgagtta
gttaagtcaacaggacagcagaattcatcatctcatatcctggaagtcttcagaggttcc
atgagccaaattgttaagaggtacagacacgacactgtgaagcttcatggatcagggaaa
catcttgggaagggggaagcatcccgaattttgcgccatcttgttacggaggatgtgctt
gtggaggaagtaaagaaaagtgatatatatggatccgtatcatcagtattgaaggtaaat
gattctaagttctacgatattagctgtggtggcaagaagattattttaaggttccccaca
tccacaaaaacagttaaagctgcggtgacaaaaggcccacttgcctcgtcagggaagatg
agcaataagcaatatgaaactcctgtcgagaaaccttatgaaactcctgatgagaaacct
caaagtgaagctgagcagcttctttctgccacagtttatggtgctttgagactgcttcga
actaatcttataagagaagctgctgaaggtggtgtcaatcttgcagcacaccacatattt
gcgaataacgtgttacataatttgagcaaagcgatccccagaacaaaagaagaacttctt
gaagtgaatggcatcggcagggccaagctagccaaatacggagatcgggtacttgaagcg
attgacataacagtaaatggcttccatagcaaggacaagagtaacaacagcagtggtagc
gacaagagaaggagaaatttgactggaacaactaactcaggttttatagaggacgatgat
gacttcactgacagtactggctcactgaagaaaagggcatcagatgaagctatgaataga
aataccgagtataatgattttgatgcggcgagatatgatcaatgcattgatattgatcta
gattgggaagacctcaacgacgatggaaacattaatggttcaaatgcgaataacgagcta
ggtagagtattaccttcttgggcagccggaaacaagtctcaaactcaaggtcgtaatctg
taccaagaattcgcatataagggatga
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integrated database retrieval system
