Papaver somniferum (opium poppy): 113283529
Help
Entry
113283529 CDS
T05758
Name
(RefSeq) pre-mRNA-processing protein 40A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113283529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113283529
Spliceosome [BR:
psom03041
]
Complex A
U1 snRNP components
U1 related factors
113283529
Complex B
113283529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
FF_RHG35_4th
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
113283529
NCBI-ProteinID:
XP_026388611
LinkDB
All DBs
Position
5:complement(165031286..165043176)
Genome browser
AA seq
1009 aa
AA seq
DB search
MTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPPGSQQFRPVGQ
GMPVPNVGPSPQNQQLPFPPSMHQLHQRPGQPGHGPQPSQAIQMPFMQQNRPITSESPQP
HQNNQHMPGVGGSGMPPSSYTFAPSPYGQPQNNINASSHYQPISQMHTGVAPAGGQTWLP
SGPVATAMQGQQSSATAAAVPATNLQPNPSIQLSSDWQEHTSTDGRRYYYNKKTKQSSWE
KPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKLAREQAEREASQG
VQSESASLSQPQVSLTIPLPEASIPSSAPSGTTTSPVSVAPIVAVANQPTIAASGSPSLP
VLSTNAAGVQSPVAAVTTLSNSTSRDGGVPVATTPAASTSDIANSLDGGASIQDLEEARK
GMAVAGKINVTPSEEKAVEEETLVYANKQEAKIAFKALLESANVESDWNWEQAMRVIIND
KRYGALKTLGERKQAFNEYLGQRKKQEAEERRVRQKKAREEFAKMLEESKELTSSTRWPK
AMIMFENDERYKAVDRARDREDIFENFTLDLQKKEKAKAQEEHKKNIMEYKQFLESCDFI
KPSSQWRKVQDRLEDDERCSRLEKIDRLDIFQEYIRELEKEEEEQRRIQKEQLRRAERKN
RDEFRKLMEEHVAAGDLTAKTHWRTYCMKVKDLPAYMAVSSNTSGSTPKDLFEDVAEELE
KQYRDDKTRVKDALKLGKITMSSALTYEEFKAAIAEDLNSVSDINLQLVFEELQERIKEK
EEKETKKRQRLADDFSDLLHSIKDITTSSNWEDCKPLFEDSQEYRSIAEESDKKELFEDY
IRLLQEKAKEKERKRDEEKAKKEKERDDKEKRKEKDRKEKERERDRDKERERSKKDDTES
DTVDASDVKEERKRDKDKDRKHRKRHQSGAGDMSSEKEEKDDSKKSRRHSSSRKKSRKHA
YTPDSDSEGGHKRHRKDHRDGSRRNGTNEELEDGELGEDGEIRANKGHP
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtaattcacaatcgtctgggacccagccgctttggcctccgattgttggatca
gctggtcctcctcagaactttggcccacccatgtctatgcagtttcggcccgttggttct
caacaacaaggacagccttttattcctccagggtctcaacagtttcggcctgttggtcag
ggaatgcctgtaccaaatgttggaccgtctcctcagaatcagcagctcccttttcctcca
tcaatgcatcagttacatcaaagacctggtcagccaggtcatggtccacagccatcacaa
gcaattcagatgccattcatgcagcaaaaccggcctattacctcagagtcgcctcagcct
caccaaaacaaccagcatatgccaggtgtaggtggcagtgggatgcctccttcctcatat
accttcgcaccatctccctatggccagcctcaaaataacattaacgcatcatcacattac
cagccaatctctcaaatgcatacaggggttgcacctgctggtggacaaacttggttgcca
tcgggacctgttgccacagcaatgcagggccagcaatcatctgctacagctgctgcagtt
ccagcaacaaatcttcaaccaaatccctccattcagttgtcatcagattggcaagaacac
acgtctactgatggcagaaggtattattataacaagaagacaaagcagtctagttgggaa
aagcctgttgaactaatgacaccaattgagagagctgatgcatccactgattggaaggag
ttcactaattcagatggaaggaagtattattacaataaggttaccaagctatctaaatgg
acaatacctgaagaattgaagttggctcgcgagcaagcagagagagaagccagtcaaggg
gttcagtcagaaagtgcttcgctttctcaaccccaagtgtctctcactattccgttgccc
gaagcatctataccatcatctgcaccatctgggacaacaacaagccctgtttctgttgcg
ccaatcgttgccgttgcaaatcaacccactattgcagcttctggatcaccatcccttcct
gttctgtcaacaaatgctgctggagttcaatctccagttgcagctgtcactaccttatct
aattctacttccagagatggtggagttccagttgccactacaccagctgcgagtacttca
gatattgcaaattctttagatggtggagcttctatccaagatttagaggaagcaagaaaa
ggaatggcagttgctgggaaaattaatgttaccccatccgaggagaaggcagttgaagaa
gaaaccttggtttatgcaaataaacaggaagctaaaattgcatttaaagcgctcttggaa
tctgcaaatgtggaatctgactggaactgggagcaggctatgagagtaataataaatgac
aaaagatatggcgccttaaaaacacttggggagcggaagcaagcgtttaatgagtacttg
ggtcagaggaaaaagcaagaggctgaggaaaggcgtgttagacaaaaaaaggctcgggag
gaatttgcaaaaatgttggaagaatcaaaagagcttacatcatccacaagatggcccaaa
gctatgataatgtttgagaatgatgagcggtataaagctgttgaccgagccagagaccgt
gaagatatttttgaaaattttacgctggacctacagaagaaggaaaaggcaaaagcacag
gaggagcacaagaagaatataatggagtacaaacaattcctggaatcttgtgattttatt
aaacccagcagccaatggcggaaagttcaggatcgcctagaggatgatgaaaggtgctca
cggcttgaaaaaattgaccgcttagacatctttcaggaatatatacgggaattagagaaa
gaggaggaagagcagaggaggattcagaaggagcaattgagacgtgctgagcgtaaaaac
cgcgatgagttccgcaagttgatggaggagcatgttgctgccggcgatctcactgctaaa
actcactggcgcacctattgtatgaaggtaaaggatttaccagcttatatggctgtgtca
tctaacacatccggttcaacaccaaaggatttgtttgaagatgttgccgaagagctggag
aaacagtaccgggatgataaaactcgagtgaaagatgctctgaagttgggaaagattact
atgtcgtctgctttgacttatgaagagttcaaggctgctattgcggaggatctgaactcc
gtatcagatattaacttgcagcttgtatttgaagagctgcaggaaaggatcaaggagaag
gaagagaaggagactaaaaagcgacaacgtctggctgatgacttctctgatctattacac
tcaattaaggatataacaacatcttcaaattgggaggactgcaagccactatttgaagac
agccaagagtatagatccattgcagaagagagcgataagaaggagctatttgaggactac
attagacttttgcaagaaaaggctaaagagaaggaacggaaacgcgatgaagagaaggca
aagaaagaaaaagaaagagatgataaagagaaaaggaaagagaaagacagaaaggagaag
gagagagaacgcgatagggataaggagagggaacgctctaagaaggatgatacagagagc
gacactgttgatgcatctgatgtgaaggaggagagaaaaagggacaaagataaggatagg
aaacaccgaaagcgacatcaaagtggggcaggtgacatgagttctgagaaggaggagaaa
gatgattcaaagaaatcacgaagacatagtagttctaggaaaaaatcaagaaagcatgca
tacacgcctgattcagatagtgaaggtgggcacaagagacatcggaaagatcatagagat
ggttcccgcagaaatggcactaatgaggagcttgaagatggggaacttggagaggatggg
gagatacgtgcgaacaaaggccatccctga
DBGET
integrated database retrieval system
