Papaver somniferum (opium poppy): 113283589
Help
Entry
113283589 CDS
T05758
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3-like
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113283589
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
113283589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
113283589
NCBI-ProteinID:
XP_026388695
LinkDB
All DBs
Position
5:complement(169036143..169041090)
Genome browser
AA seq
614 aa
AA seq
DB search
MGMELEGEMEEYIDTGEIEYDDSDVVAHIRGILLQVAKGGKSEYHDLVGKLNQPGRDPDE
VASLVMCLKGLSGAVAFIDIVRHESLLQAILGMSMWRYNPDVMDVLVDLIIRLATSSGEF
LDSCLNMLVTNFTPPFKIDLDTPRGVVKKEQVLDRVHSALINITELVPLVPMRLVPILLY
QMPHTNADEQMMALYAESMLRLECGPIGEFVGSTMLLALVDRLVELDVEIEWDDIEQSES
NKGIFHMDLEDIDGEDNGYGLAKTIKLPPNLDITNEIARRLAYLKKYSQNLDYLLVLIFQ
HLKSCAENGRLAKVFPTLLQSFHDTVLNTQKSKFAQFFMFYACSLDPEVCGMSFLFMLRD
VFLCNTGIQLTRMSSVAYLASYLSRAKFLAGHIIASTLQRLVNWCVEYCQFVGAEEKTLN
PEAHRLFYSGCQAIIYVLCFRMREMLDDPDQKSIILGFPLQRIFRDPLDPLKVCLPLVVD
EFLKQAKAASLITASENFLFKNLLESDLSKAFGGVERLDMFFPFDPCLLKRSERFIKPIF
LHWSDVVPPYDDEEDFEEQLGDEVDDHLSDDDIEDSMNKMSITPKSSLKVSMGGDHKMIP
QRMPARIRPSTSPS
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgggaatggaactagagggagagatggaagaatatatcgatacaggagaaattgaatac
gatgattcggatgtggtcgcacatattcgtggtatcctattacaagttgctaagggtggg
aaaagcgagtatcatgatttggttgggaaattgaaccagcccggaagggatcccgatgaa
gtggcgtcgcttgtgatgtgtttaaagggtttatctggagcagttgcgtttattgatatt
gttcggcatgagagtcttctgcaagctattctcggaatgagcatgtggagatataatcca
gatgttatggatgtgttggtggacctgattatacgtttggctacttctagcggagaattt
cttgactcgtgtttgaacatgcttgttaccaattttacaccgccttttaaaatagatctg
gatacacctcgtggcgttgtaaaaaaggaacaagtgcttgatcgggtgcattcagcattg
attaacatcaccgagctggtgcctcttgtacctatgagattagtgcccatacttctttac
cagatgcctcacactaacgctgatgaacagatgatggcattatatgcggagagcatgtta
aggcttgagtgtggtccaattggagaatttgttggaagtacgatgctattggcattggtg
gataggcttgtagaattagatgtggaaatagaatgggacgatattgagcaaagtgaatca
aataaaggcatatttcatatggatctagaagatatagacggcgaagacaatggttatggg
cttgctaaaacaattaagcttcccccgaatttggatatcacaaatgagattgctaggagg
ctggcttaccttaaaaagtactcgcagaatctggattacttgttggtactcatatttcaa
catctcaaatcttgtgctgaaaatggtcgtttggcgaaggtgttcccgacacttctccag
tccttccatgacactgttctaaatacccagaagtcgaagtttgcccagtttttcatgttc
tatgcctgctcattagatcctgaagtgtgcggtatgagctttctgtttatgcttagagat
gtttttttatgcaataccggaattcaactcaccaggatgagttcagttgcttatctagct
agttatttgtctcgagctaaatttcttgcagggcatatcatcgctagcacattacaacgg
ctggtaaattggtgcgttgaatactgtcagtttgttggtgctgaagagaaaacattaaac
ccggaagcacatagacttttttattctggatgccaggccatcatatacgtgctctgcttc
cgtatgagggaaatgttggatgatcctgatcaaaaatcgataattttaggatttcctcta
caacgtattttccgagaccctttggatccattgaaggtctgtctgcctttagttgtggat
gaatttctgaagcaggcaaaagctgcttctctgattacggcatctgaaaattttcttttt
aagaacttgcttgagtcagatctttcgaaggcttttggtggagtggaaagacttgatatg
ttttttccttttgacccatgtctattgaaaagaagcgagagatttatcaaaccaatcttt
ctgcactggtcggatgttgtccctccatatgatgatgaagaagattttgaggagcaactt
ggtgacgaggttgatgatcatttgtcagatgatgatattgaggactccatgaataaaatg
tcaattactcccaagagttccttaaaagtcagtatggggggtgaccataagatgatcccc
cagagaatgcctgcccgaatcagaccttcaacaagtccgtcataa
DBGET
integrated database retrieval system
