Papaver somniferum (opium poppy): 113283693
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Entry
113283693 CDS
T05758
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113283693
Spliceosome [BR:
psom03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113283693
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Phage_tail_terminator_5
Motif
Other DBs
NCBI-GeneID:
113283693
NCBI-ProteinID:
XP_026388810
LinkDB
All DBs
Position
1:complement(38925124..38930535)
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AA seq
451 aa
AA seq
DB search
MTEPSKVIHVRNVGHEIAENDLLQLVQPFGVVTKLVMLRAKNQALLQMQDVAAAVDVIQY
FTNVQPSVRGRNVYIQFSSHQELTTMDQNGQGRKSGEQISQETEPNRILLVSIHHLLYPI
TVEVLHQVFSPHGYVEKIVTFQKSAGSQALIQFQTRQSAVAARTALQGRNIYDGCCQLDV
QFSNLSELQVNFNNERSRDYTNPSLPTEQKGRSSQPNYAEGGLYGVQPSGARPGGYPQMG
NAAAVAAAFGGGLPPGISGTNERCTVLVSNLDPDRIDEDKLFNLFSIYGNIVRIKLLRNK
PDHALVQMGDGFQAELAVHFLKGAMLFEKRMEVNFSKHPTITAAPDTHEYQNSNLNRFNR
NAAKNYRYCCSPTKIIHLSTLPQEITEEEIVCHLEEHGTIVNTKLFEVNGKKQALIMFET
EEQATEALVCKHAITINRSVIRISFSQLQNI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccttctaaggtcattcatgttcgtaatgtaggccacgaaatagccgagaat
gatttgcttcaattagtacagccatttggtgttgtcactaagcttgtcatgttaagggct
aaaaatcaggcacttcttcagatgcaagatgtggcagctgctgttgatgtgatacagtac
ttcactaatgttcaacctagtgtcagagggaggaatgtttacattcagttctcttcacat
caagaattgacaacaatggatcagaatggtcaaggacgcaagagtggtgaacagatatct
caggaaacagaacccaatcgaattctattagtatcaattcatcacctgctctatcctata
acggtggaagtgctgcatcaagtgttctctcctcatgggtatgtggagaagatcgtcacg
tttcagaagtcagctggttctcaagcccttatacaatttcaaacacgccagagtgctgtt
gctgcaaggacagctctccaaggacgcaatatttatgatggttgttgtcagctggatgtt
cagttctcaaacctcagtgagttacaagtaaacttcaacaatgagcgctctagggattac
accaacccatctttgcctactgaacaaaaaggcagatcctcccagcctaactatgctgag
ggaggtttatatggtgtacaaccttctggagctaggccaggtggatatccacagatggga
aatgcggcagctgtagcagctgcatttggaggcgggttgcctcctggtattagcggtacc
aatgaacgatgcacagtcttggtttccaaccttgatcccgatagaattgatgaggataag
ctcttcaacctattctccatttatggaaacatcgtgagaatcaaacttctccgcaacaaa
ccagatcatgcccttgttcagatgggtgatggatttcaagctgaattggctgtacacttc
ttgaagggagcaatgctgtttgaaaagcgtatggaggtgaacttttcaaagcatccaact
attactgcagctcctgacacacatgagtaccagaattcgaacctgaatcggttcaatcgc
aatgcagcaaagaattaccgttactgctgttccccaaccaagattatccacttgtcaacc
ctccctcaagaaattacagaggaagaaattgtttgccacctcgaggagcatggaaccata
gtgaacaccaagctttttgaagtgaatggcaaaaaacaggctcttatcatgtttgaaaca
gaggagcaggccactgaggctctcgtgtgcaagcacgcaataaccataaatcgctcagtc
atccggatctccttctcccagctgcagaacatctaa
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