Papaver somniferum (opium poppy): 113284311
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Entry
113284311 CDS
T05758
Name
(RefSeq) E3 ubiquitin protein ligase RIN2-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113284311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113284311
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
113284311
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113284311
Multi subunit type E3
ERAD complex
113284311
LMBR1L-GP78-UBAC2 complex
113284311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
CUE
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_11
zf-C3HC4_2
zf-C3HC4_4
U-box_ZFPL1
zf-C3HC4_3
zf-RING_16
zf-RING_5
zf_RING_Vps8_fungal
E3_UbLigase_EDD
PHD
Endonuclease_7
zf-RING_Vps41
zf-HC5HC2H
Prok-RING_4
RING_XB3-XBAT31
zf-C3HC4_IRF-2BP1_2
zf_RING_Vps8
RINGv
Motif
Other DBs
NCBI-GeneID:
113284311
NCBI-ProteinID:
XP_026389533
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All DBs
Position
5:201819779..201826013
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AA seq
589 aa
AA seq
DB search
MGISYISVSVVCAVGSFLGLQWWTLSLLDKFKLDGLIAENYIHSENANHALDLLLGSNVI
IALLVNFVINLYVLLILCLKAIFFVQLHATETRKVVERCVNYIIYKGAFLPLIVPPTVSQ
AALWSTWLTVLCTLKMFQALGRDRLEWLNASPSATPWTYFRVFSVLLLVLSADVFWLRLC
IIIYRSLGSTMFLLLFFEPLSIAFETVQAVMVHGFQLLDMWQRHSVESNTDCQSSQLFSR
SVAGSLLEWKGLLVRNCGFVLDIMTWLMALGHYLHIWWLHGMAFHLIDAVIFLNIRALLS
AVIKRIKGFVKLRVALSSLHGALPDATSEELQAYDDECAICREPMAKAKKLSCNHLFHLA
CLRSWLDQGTNEVYSCPTCRRSLFPGARENSTHSRTEEALNNEHLARQIGYGSDTQNAPD
RVPPAGTFPNQPQAPPDGIPWRVGLESNWGQPWPNQGSDGAGPSSTAVRSVGLGRVQMMM
RHLASVGETYAQTAIEDAAWGLWPTPHPQAASGSSVLPPQAAAALGYNGHIGGLRIRNPT
HSVNDNMSAILAMAETVREVLPHIPNEIIFQDLQRTNSVAVTVNNLLQM
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgggtattagttacatatctgtttcagtggtgtgtgcagttgggagtttcttagggcta
cagtggtggacactatctttactagacaagttcaaattagatggtttaattgctgagaat
tatatacattctgagaatgctaatcatgcacttgacttactattgggatccaatgttata
attgcactgttggtgaattttgtgatcaatctatacgttctgctcattttgtgtctcaag
gctattttttttgtccagctgcatgcaactgagacgcgaaaagtagtggaacgatgtgta
aattacattatatacaagggggcgtttcttcctttgattgtaccacccactgtttcccaa
gcagcattatggtcaacttggttgacagttctctgtaccttgaagatgtttcaggcattg
ggtagagaccggctggaatggctgaatgcatctccttctgcaacaccatggacatacttt
cgcgtcttttctgttctgctgctggttctatccgctgatgtcttctggttaagactttgt
atcataatatatagatcactgggttcaactatgtttttgctgttattctttgaacctctc
agtattgcttttgagactgtacaggcggtgatggtgcacggatttcagctccttgatatg
tggcaacgacattcagtagaaagcaacacagattgccaaagctcccagctctttagcaga
tcggtggcaggttctttattggaatggaagggccttcttgttcggaactgtggttttgtc
ctagacataatgacctggttgatggctctcggtcattacttgcatatctggtggcttcac
ggcatggcgttccatctaattgatgcagtcattttcctaaacatacgcgctctgctaagt
gcagttataaagaggatcaaaggatttgttaagctgagagtagctcttagttctcttcat
ggggcacttcctgatgcgacatctgaagagttgcaagcatatgatgatgaatgtgccatt
tgcagggaaccaatggcgaaggcgaaaaaactatcctgtaatcatcttttccatcttgca
tgcctgagatcatggttagatcagggtacgaacgaggtttattcatgtcctacatgtcga
aggtcgctatttccaggcgcacgtgaaaacagtactcactcccgtactgaggaagccttg
aataatgaacatcttgcccgtcaaataggttatggatcggacacacaaaatgcaccagac
cgtgtcccgcctgcaggaacatttcctaaccaaccacaggctcctcctgatggtatcccg
tggagagttgggttggaatcaaattggggacaaccttggccaaaccagggttccgatggt
gctggtccatcaagtactgcagtgagatcagttgggttaggcagagttcagatgatgatg
agacatttagcatctgtgggtgaaacctatgcccagactgccattgaagatgctgcatgg
ggtctttggcctacgccacatccccaggctgcgtctggctcttctgttcttcctccccaa
gctgctgctgctttaggctataatggacatattggtggtttacgcatcaggaatcccact
cattctgtgaatgataacatgtcagctatacttgccatggcggagactgtcagggaagtg
cttccccatattcccaatgaaataatttttcaggacttacagcgtacaaactctgtcgct
gtcactgtaaataatctacttcaaatgtga
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