Papaver somniferum (opium poppy): 113284357
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Entry
113284357 CDS
T05758
Name
(RefSeq) small RNA degrading nuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113284357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113284357
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
RNases
113284357
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Phosphodiest
Motif
Other DBs
NCBI-GeneID:
113284357
NCBI-ProteinID:
XP_026389586
LinkDB
All DBs
Position
1:complement(43032497..43038183)
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AA seq
583 aa
AA seq
DB search
MSSPCEKLDGDTIPKEVNEEIDTTTTAAATTTTTTNDCNTFLNNFYGPEAKADVEFKTTG
ANSTLNLEDVQGLVTWVLSEGTMPSWIFIKNKPLIPKVVLLYVPGLDAALFMSKSRLLAG
LKEICWNPRPVLALSCVSDGMQTIDALLTAKLKRKREPCTLDIKESDQAEEPDQSSNSVS
LSRKKSLKDIPFPISYYTLTPRELEDNGYCNTHPDFVSTVPTPLGSSPHEILALDCEMCI
TAMGFELTRATLVDIEGRVLLDKLVKPTNEITDYNTRYSGITCEMLNGVTTTLQDIQAEF
LNLVHQETVLVGHSLENDLLALKLIHKLVIDTAVLYKNPHGGNYKCALRVLARRFLCRVI
QDSGNGHDSAEDARAALELAFLKFRHGPEFGAAPSLTRKKLLTILGESGKACSVIDDVSI
VKRYATGSSHAFPVSCDDEALSKASKEVKNDKVHFIWSQFSELNSFYKRQADDTEKVNVK
VAQMIASLTCHNKSKGLRYPISPELKAVLKRTDTRIQSLYAALPTNSMLILCTGHGDTAI
VKRLRKMLGEQKDFPAGREKLIKVLEELQAQSEVALCFVRVKN
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccatgtgagaaactcgacggagataccatacctaaagaagttaacgaagaa
attgataccaccactaccgccgccgccaccaccactaccaccaccaacgattgcaatacc
ttcttaaataatttttacgggcctgaagcaaaagcagatgtggaatttaaaacgactggg
gctaactcaacattgaatcttgaagatgttcaagggcttgtaacatgggtgctttctgaa
gggaccatgccttcttggatctttataaagaacaagcccctcatacccaaagtggttctg
ctgtatgttccaggtcttgatgcagctttgttcatgtcaaagtccaggcttttggctggg
ctgaaagaaatttgttggaatcccagacctgttttagctctgagttgtgtatcagacggg
atgcagacaatagatgcgttattaacagcgaagttaaagagaaagcgggagccatgtact
ctggatatcaaggagtctgatcaagcagaagaaccagatcaaagttcaaattcagtcagt
ctgtccagaaaaaaaagcttaaaagatataccatttcctatttcttattatacgcttaca
ccaagagagttggaggacaacggatactgtaacactcatccagactttgtctcaactgtt
ccaactcctttaggatcttctcctcatgaaatacttgcactcgactgtgagatgtgtatc
acagctatgggatttgagcttactcgggcaactcttgtggatattgaaggacgggttctg
ttggacaagctggtcaaacctacaaatgaaattaccgactataatacgagatacagtgga
atcacatgtgaaatgctaaatggggtgactacgacacttcaagatattcaggcggaattt
cttaatttagttcatcaagagacggttctagttggccattctttagaaaatgacctgtta
gcgctgaaattaattcataaattagtaatcgataccgctgtactgtacaaaaatccacat
ggcggaaattataagtgtgctctgcgagtgcttgcgaggagatttctttgtagagtaatc
caggattcaggaaatggacatgacagtgctgaagatgcaagagctgcactggaactagca
tttttgaaatttagacatggacctgaatttggtgctgctccctcgctcacaaggaagaag
ctgcttacaatcttgggtgaaagtggcaaagcgtgctccgttattgatgatgtttccata
gtgaagcgatatgctactggatcttctcatgcatttccagtgtcatgtgatgatgaagct
ctttcaaaggccagcaaggaggtaaaaaatgacaaggtacactttatttggagccagttt
tccgagttgaattcgttttacaagagacaagcagacgatacagagaaggtgaatgtgaaa
gttgcacaaatgatagcttcgcttacatgtcataacaaatccaagggtcttcgataccct
atctcacctgaactgaaggccgtcttaaagcgcacagatactaggatccaaagcctatat
gctgccttacctacaaattcaatgcttatcttatgcaccggtcatggagatacagcaatt
gtcaaaagactgcggaaaatgctgggagagcagaaggatttcccagctgggcgcgagaaa
ttgataaaagttctggaagaactccaggcacaatctgaagttgctctttgttttgtccgt
gtcaagaattag
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