Papaver somniferum (opium poppy): 113284405
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Entry
113284405 CDS
T05758
Name
(RefSeq) pre-mRNA-splicing factor CWC25 homolog isoform X1
KO
K28450
pre-mRNA-splicing factor CWC25
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113284405
Spliceosome [BR:
psom03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113284405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cir_N
CWC25
DUF3417
Motif
Other DBs
NCBI-GeneID:
113284405
NCBI-ProteinID:
XP_026389636
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All DBs
Position
5:complement(205222392..205226038)
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AA seq
520 aa
AA seq
DB search
MGMKFLNKKGWHTGSIRNIETVWKAEQKRAAEDLKIEELRKQIKEEREKAEFRQLQVEAG
LVPRQERLDFLYDSGLSVGKPSSADGFKELEALPTAAPVASSSTAKPEASNPGALFEEKP
QSANDAWRKLNSDPLLLIRKREQEALARIKNNPIQMAMIKESVGGKKKHDDKERKKKKKK
SKHSSSKGSVGTKDDAATSKGEERKEKSHRHDSGHPDNRSSDSEADIYERKERNKKSYHT
STHNRSDTELDSTERDERNKRSYHRSTRNRSDSEPGSPERGDRMSYHKATHNRSDSEPES
TEREERDRRSYHKSTEREERDRRSYHKSTEREERDMRNYHKSTRDISDSEPDTTDRGERN
RRTYHGSTHSESEWSRKRSSHDYSSFENNEKKSYTETIRATNDRPDTEDDWRSKSRPKHR
QTAVKLTEEEKAAKLREMQMDAEVHEEQRWKRLKKAAEDDALEEKRSAIRKEATFLDEAR
KSAYGSGKGGSSTIEESVRRRKFFMQGQAAAGGETNAFRR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggggatgaaatttttgaacaagaagggatggcatacaggaagtataagaaacatagag
actgtatggaaagccgaacagaaacgtgctgctgaagatctgaaaattgaagagctccgt
aaacaaatcaaagaagaaagagagaaagctgaattccgtcagcttcaagttgaagctggt
cttgttccgaggcaagagagattagattttctgtatgattctgggttgtcggttggaaag
cctagttctgctgatggttttaaggagcttgaagcattaccaactgctgctccagtagcc
tcatcgtcgacggcaaagccagaagcatctaatccaggagctttattcgaagagaagcct
cagtctgctaatgatgcatggaggaaacttaattctgatcctctgctcctaatccggaag
cgggagcaggaagcgcttgctagaatcaagaataaccctatccagatggccatgattaaa
gaatctgttggcggaaagaagaagcatgatgataaagaacgcaagaagaaaaagaagaaa
tcaaagcattcctcatctaaaggttcagtgggtacgaaggatgatgccgctactagcaag
ggtgaagaaagaaaagaaaagagccataggcatgactcggggcatccagacaatcgtagc
tcagactctgaagccgacatatatgaaaggaaggagaggaataagaagagttatcataca
tcaacacataacagatcagatacagaacttgactcaactgaaagggatgagaggaataag
aggagttatcataggtcaacacgtaacagatcagattccgaacctggctcacctgaaaga
ggggataggatgagttatcataaagcaacacataacagatcagattcagaacctgagtca
actgaaagagaggagcgggataggagaagttatcataaatcaactgaaagagaggagcgg
gataggagaagttatcataaatcaactgaaagagaggagcgggatatgagaaattatcat
aaatcaacacgtgacatatcagattcggaacctgacacaactgatagaggggagaggaat
aggaggacttatcacggatcaacacattcagagtcggagtggagtagaaagaggtctagt
catgattacagttcattcgaaaacaatgagaagaagtcttacactgaaaccattcgcgca
acaaatgacagaccagacacagaagatgattggcgtagtaagtcacgtcctaagcatcga
cagactgcggtgaagcttactgaagaagagaaggctgctaaattgagagagatgcaaatg
gatgctgaggtgcatgaggaacagagatggaagcggctgaagaaagcagcagaggatgac
gccttagaggaaaaacgatcagctattcggaaagaagccactttcttggatgaggcacga
aagagtgcctatggatccgggaaaggtgggagctccacgatagaagagagtgtccgtcga
cgtaaatttttcatgcagggacaggctgccgctggtggcgagaccaatgcatttaggcgt
taa
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