Papaver somniferum (opium poppy): 113284522
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Entry
113284522 CDS
T05758
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein D0-like
KO
K14411
RNA-binding protein Musashi
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113284522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113284522
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113284522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
UBA_At5g58720
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
113284522
NCBI-ProteinID:
XP_026389794
LinkDB
All DBs
Position
5:complement(210797246..210801097)
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AA seq
534 aa
AA seq
DB search
MEASVYRALMESDSGETKVLEALIDAFSSEFSLREIASAYCKAGRDPDRAAEILCDGQKL
KNCSNAASAVITTQREANCTLSSASSESLCESVDDKPSSADYWNSKAQELSVGSVSGVIG
KGNAMPNTPAWGPVSRIRPSYSEILGESVATNWGADEGLKASELKNSALSVGSVSGVIGE
GNVIPNTPAWGPVSRIRPSLSETLGESVATNWGVDEGLKASELKNSALSVGSVSGKCLIC
SRPACGPLGATKPLKSDMKDFWFDELSDDDVASDSTAKEDQMHTGEGRIFVGGLSVEVNE
DNLEDHFKKFGEVVGTRIVKHKDTGSSRGCGYVLFSDPAVADRVVLEKHVILGSLVRVVT
AVPRPRVGHNNPYNQKGFNKSNDNNGQFRTKKIFVGGLPYSLTEEDFKAYFEKFGRTTDV
VIAYTPSRDRHRGFGFITFDSEEAVENVMQKRFHELFGKLVEVKKNESNNGHSGGYHMGK
NGGRGGSSSGGVQGGGISPRSRPGYGESYSGYSPQLSGYATAEGTPVVSPWSLL
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggaagcatctgtctatagggcattgatggagtctgattctggggaaacaaaagttttg
gaagcgttgattgatgcgtttagttcagaattttctcttagggagatagcttctgcctat
tgcaaggctggccgtgatccagatagggctgctgaaattctttgtgatggtcaaaagttg
aagaactgctctaatgctgcatctgccgttattaccactcaacgtgaagcaaattgtaca
ttgtcatcagcttcatcggaatctttatgtgagagtgttgatgacaagccaagttctgca
gattattggaattctaaggcgcaagagctgtcagttggtagtgtttccggtgttattggt
aaggggaatgcgatgcctaacacacctgcatggggtcccgttagcagaataaggccttca
tattcagaaatcttgggtgagagtgttgctacaaattggggtgcggatgagggtttgaag
gcctcggaactgaaaaactcggccttgtcagttggtagtgtttccggtgttattggtgag
gggaatgtgatacctaacacacctgcatggggtcccgttagcagaataaggccttcatta
tcagaaaccttgggtgagagtgttgctacaaattggggtgtagatgagggtttgaaggcc
tcggaactgaaaaactcggccttgtcagttggtagtgtttctggcaagtgtttgatatgc
agcagacctgcatgtggtcccctgggcgcaactaaaccattgaaatcggatatgaaagac
ttttggtttgacgaactctcagatgatgatgttgcatcagattcaacagcaaaggaggac
caaatgcatacaggagaagggaggatttttgtgggtggactctcagtggaagtcaatgaa
gataatttggaagatcattttaagaagtttggtgaagttgtggggacaaggattgtaaaa
cacaaggatacaggtagttcaagaggttgtgggtatgttctcttctcagatccagctgta
gctgatagagttgttttagaaaaacatgttattcttggaagtttggttagagttgtcact
gcagttcccagacctagggttggacataataacccttacaaccaaaagggttttaacaag
agtaatgataataatggtcagtttaggacaaagaagatttttgtaggtggtttaccttat
agcttgactgaggaagattttaaagcttattttgagaagtttggtagaactactgatgtt
gttattgcgtatactccttcaagagatagacatagaggttttggttttatcacatttgat
tctgaggaagctgtagagaatgtaatgcagaagaggtttcatgagttgtttggcaaacta
gttgaggttaagaaaaatgagagtaataatggtcacagcggtggttatcatatgggaaag
aatggtggaagaggaggatcttcttctggtggtgtacaaggtggtggaattagcccgcgg
tcaaggccaggatatggggaaagttactctggatattctcctcaactttcaggttatgcc
actgctgaagggaccccagttgtgtcaccctggagtctactatga
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