Papaver somniferum (opium poppy): 113284525
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Entry
113284525 CDS
T05758
Name
(RefSeq) structural maintenance of chromosomes protein 3-like
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psom03036
]
113284525
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
psom00535
]
113284525
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
113284525
Meiosis-specific proteins
Cohesin complex and associated proteins
113284525
Proteoglycans [BR:
psom00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
113284525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
DUF7491
Motif
Other DBs
NCBI-GeneID:
113284525
NCBI-ProteinID:
XP_026389798
LinkDB
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Position
5:complement(211014081..211024395)
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AA seq
1202 aa
AA seq
DB search
MYIKQIIIQGFKSYREQIETEEFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRNED
RHALLHEGAGHQVLSAFVEIVFDNSDNRMPVDKQEVRLRRTIGLKKDEYYLDKKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIGKLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
DTGNKRKQIIQVVQYLDERLRELDEEKEELKKYQQLDKQRRSLEYTIYDKELQEARQKLE
GVEEARNKVSETSAKMYNDVLDAHENAKKLEKEAKDLHKNILVLSKEKEVIEKQRTEAMR
KHAQVDLDVRDLEERISGSKREKEEAAAELDGLERKIQESKNELETIRCSYNDQMAKEEE
LTKGIMDREKQLSILYQKQGRATQFANKVARDKWLQKEVDDLKRVLSSNLEQEKKLQNEI
QGLNSGLQNQAAYIEERETEYKKLESCIPKYQDGFRSLKKQRDELQDKRKSLWERESELS
SEIDKLKSEVQKAEKSLDHATPGDIRRGLNSVRRLCRDHNIRGVFGPIIELLDCEDKFFT
AVEVTAGNSLFHVVVETDEISTRIIRYLNSEKGGRITFIPLNRVKPPHVKYPNNGDVVPL
LKKLKFSPHHSPAFQQVFGRTVICRNLDVATTVAKVDGLDCITLEGDQVSKKGAMTGGFY
DHRRSKLKYMDAVKQNTKAVTSKQEELNKLRSELEEIDQEITKLVSEQQKYDAEQSHNKS
ELEQIRQDIVNAKKQRESMSKALQKKEKLLANSRTQIDQLQSSITAKEHEMGTDLVDHLL
PDERELLSRLNPEITELKEKLIACKTNRIETETRKGELETNLSTNLVRRQQELLAIRSSA
DADTLLGEVEQKRHDRIEAKEYVDDATQRLNRVSKKVDEHTKQMKDIKDERNKLKALEDK
YERTLQEEAKALDQLLSKRNTLLAKQEDCMKKIRDLGSLPSDAFEKRKNIKELHKMLHKC
NEELQQFSHVNKKALDQYVNFTEQREELQQRQAELDAGDDKIKELIQVLDHRKDESIERT
FKGVARHFREVFSELVPGGHGFLVMMKKKDAGHGDDDHDEEGPREADAEGRVEKYIGVKV
KVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVGN
MVRRLADMANTQFITTTFRIELVKVADKIYGVTHKNRVSFVNVISKDQALRFIEHDQSHN
AE
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaagcagattattattcaagggtttaagagttacagagaacagattgaaact
gaagaattcagtcctaaagttaattgtgttgttggtgctaatggatctggaaaaactaat
ttctttcatgcgattcgatttgtactgagcgatctcttccagaacttgcggaatgaggat
agacacgcccttctccatgaaggtgcaggacaccaagtattatctgcctttgtggagata
gtgtttgataattctgataatcgcatgcctgttgataagcaagaagtgcgtttgaggaga
actattggtctgaagaaggatgagtattatttggataaaaaacatatcacaaaaactgaa
gttatgaatttactcgaaagtgctggtttctctcgttccaatccttactatgttgttcag
caaggaaagataggaaagttgacattgatgaaagactctgagcgactggatctactaaag
gaaattgggggcacccgagtctatgaagagagacgccgcgagagtttgaaaattatgcaa
gatactggtaataagaggaagcagataattcaagttgttcagtatttggatgagagactt
agagagctagatgaagagaaagaggaactgaaaaaatatcagcagcttgacaagcagcgg
agatctttggaatataccatttacgacaaagaactccaagaagctagacaaaaattggag
ggggtagaagaggctcgcaataaagtttcagaaacatcagccaagatgtataatgatgtg
ctagatgcccatgaaaatgcgaagaaattagagaaggaagctaaagacctccacaaaaat
attctagttttgagcaaagagaaagaagttatagagaaacagcggacggaggcaatgagg
aagcatgcccaggtcgatcttgatgtcagagatttagaagagagaatttctgggagtaag
agagagaaggaggaagctgctgcggagcttgatggtcttgaaaggaaaattcaggaatcc
aaaaatgagctggaaacaattcgatgttcatacaatgatcagatggcgaaggaagaagaa
ttaacgaaagggataatggatagggaaaagcagcttagcattctgtatcaaaagcaaggc
cgtgcaactcagttcgctaacaaggttgctcgagacaaatggcttcaaaaggaagttgat
gatcttaaacgagttctttcctctaatttggaacaggagaaaaaacttcaaaatgaaatt
caaggtcttaattctggattgcaaaatcaagctgcatacattgaggaacgtgaaacggag
tataagaagctggaatcatgcattccaaagtatcaggacggctttcgcagtttaaagaaa
cagagggatgaattacaagacaaaagaaagtcattgtgggagagggaaagtgaactttct
tcagaaattgataagctaaagtcagaagttcaaaaagctgaaaagagccttgatcatgct
actcctggtgatattagaaggggattgaattctgtcagaaggctttgtagagatcacaat
attcgaggagtgttcggtccaattatagagttgctggattgtgaagacaagtttttcact
gctgttgaagtaactgctggaaacagcttgttccatgtagttgttgaaacagatgaaata
tccaccagaataattaggtacctcaattcagaaaaaggtgggcgtatcactttcattcca
ttgaacagagtgaagcccccacacgtaaagtatccgaacaatggtgatgttgtaccgctg
ttgaaaaaacttaaattctctccgcatcatagtccagcatttcaacaggtatttggtaga
acggtgatttgcagaaacttggatgttgccactacagttgctaaggtggatggtttggac
tgcataacgctggaaggggaccaagtaagcaagaaaggtgccatgacagggggattctac
gatcataggcgttcaaagctgaagtatatggatgctgttaagcaaaacactaaggctgtc
accagcaaacaagaggagttgaacaaacttagaagcgaacttgaagagatagaccaggag
ataacgaaacttgtcagtgaacagcagaaatatgatgccgagcagtcccataacaagtca
gagctggagcaaatcaggcaggatattgttaatgctaagaagcaaagggaatcaatgtct
aaggcacttcaaaagaaggaaaagttgcttgcaaattcccgtacccaaattgaccagctc
caatctagtataactgcgaaagagcatgagatgggaacagatcttgttgatcacttgtta
ccagatgaaagagaactcctatcacggttgaaccctgagattactgaactgaaagaaaag
ctcattgcttgcaaaacgaaccggatagagacggaaacaagaaaaggagagcttgaaacc
aatctatcaacaaatcttgtaaggcggcaacaagagttgttggccataagatcgtccgcc
gacgctgatacattgcttggggaagtcgaacagaagagacacgatcgtattgaagccaaa
gaatatgttgatgatgcaacacaaaggctgaacagagtttctaagaaagttgatgaacac
acgaagcaaatgaaagatatcaaggatgagagaaataagttaaaagctctagaggacaag
tacgagcgtacgcttcaggaggaggcgaaagctcttgatcaactactaagtaaaaggaat
actcttttagcaaaacaggaggattgcatgaagaaaattagagatttgggttctttgccc
tcggacgcctttgaaaagcgcaagaacatcaaagagttgcacaaaatgcttcacaagtgc
aatgaggaattacagcagtttagccatgtgaataagaaggcactggatcagtatgtcaac
ttcacggagcaaagagaagaactccagcagaggcaagctgaactggatgcaggcgatgat
aaaatcaaggagctaatccaagttttggatcatcgaaaggacgaatcaattgaacgtaca
ttcaaaggtgtagctcggcatttccgggaagtattctctgaactcgtgcctggtggccat
ggatttttggttatgatgaagaaaaaggatgctggtcatggagatgatgatcatgatgag
gaagggcctcgtgaggcagatgctgaagggagggttgagaaatacattggcgtcaaagtc
aaggtttctttcactggtcaaggggagacgcagtccatgaagcagctctctggtggtcaa
aaaactgtagtggccttgactctgatcttcgccatacagagatgtgatcctgctccattc
tatctttttgacgagattgatgccgcactagatccacagtacagaactgctgtcggaaat
atggtacgtcgcctggcagacatggcaaatacccagtttataaccactactttcagaata
gagcttgtgaaagttgcagacaagatatatggggtgacgcataaaaatagagtcagtttt
gtaaatgtgatctccaaggatcaagctttgcgctttatcgagcacgaccagtctcataat
gctgaatag
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