Papaver somniferum (opium poppy): 113285325
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Entry
113285325 CDS
T05758
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
113285325
Enzymes [BR:
psom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
113285325
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
CarbopepD_reg_2
RhgB_N
Motif
Other DBs
NCBI-GeneID:
113285325
NCBI-ProteinID:
XP_026390021
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Position
6:2241043..2244159
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AA seq
566 aa
AA seq
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MDKLRTTTFKVIVQNENQIEVSFTRIWDTSLKGKVMPVNVDKRYIMLKDSSGFYTYAIFD
RLKGWPELSIGEARIAFKLSEEKFHHMTITDARQREMPTYQDRQKGQPLAYPEAVLLTDP
VNPAQKGEVDDKYQYSTENKDTGVHGWISVNPPIGLWMIAASNEFRAGGPNKQDLTSHTG
PISLAMFISSHYSGEDLAPKFENGEPWNKVFGPVFVYVNSAPEAKKDVFTTLWEDAKVQL
AKEIKSWPYSFPASDDFPASDQRGTVTGSLLVRDRYVNKRDIAGKSAYVGLAPPGDVGSW
QRECKGYQFWTTANADGSFSIQNVRAGEYNLFAWVPGFIGDFKHSTMIKISPGSKQNLGK
LVYEPPRAGPTVWEIGFPDRSAAEFRVPEPNKKFMNKLYANREDWFRQYGTWERYSEMYP
TRDLVYTVGVSQYQRDWFYAHVPRKLGNKSVPTTWSIVFEIKKILPSGTYKLRLALASAT
YAELQVRVNDQKAAKPLFTTGRIGKDNAIARHGIHGLYWLYTVDVPGILLRPGQNTIFLT
QTRTSSAFYGFMYDYIRLEGPPSNVA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggacaagttgaggacaacaacgtttaaggttatagtacagaatgagaaccaaatcgaa
gtttcatttacgaggatttgggatacttctcttaaaggcaaagtcatgcctgttaatgta
gataaaaggtacattatgctgaaagattcttctggtttctatacatacgctatttttgat
cgtctgaaaggttggcccgagcttagcattggagaagccaggattgctttcaaactcagc
gaagaaaagtttcaccacatgaccataacagatgcaaggcaaagagagatgcctacgtac
caagatcgtcagaaaggtcaacctttagcctatccagaagcagttctgttaacagatcca
gtcaatccagcacagaaaggagaggtagatgataagtaccagtattcaactgagaacaaa
gatactggggtacacggatggattagtgtgaatcctcccattggattatggatgattgca
gccagtaatgagttccgcgctggtggccctaacaaacaagacctcacctcccatacaggc
ccgataagtcttgctatgtttattagtagtcattacagtggagaagatctagcaccaaaa
tttgaaaacggagaaccgtggaacaaggtttttggcccggtgtttgtgtatgttaactca
gctcctgaagcaaaaaaagatgtcttcacaacactttgggaggatgcaaaagttcagttg
gcgaaggagatcaaaagttggccttacagtttccctgcttcagatgactttcctgcctcg
gatcaacggggtactgttacaggaagcttgttagtccgggataggtacgtcaacaagcgt
gacattgctggaaaatctgcgtatgttggtttggctcccccaggagacgttgggtcttgg
caaagagaatgcaagggttatcagttttggactacagccaacgctgatggatctttttcg
atccaaaatgtacgtgccggagaatataatctttttgcatgggttcctggttttattgga
gattttaagcacagcactatgatcaagatatccccaggatctaaacaaaatttgggtaag
cttgtatacgaacctccaagagctggtcctacagtgtgggagataggctttcccgataga
tctgcagctgaatttcgtgtacctgaaccaaataaaaaattcatgaacaaactgtacgct
aatcgtgaagactggttccggcagtatggaacatgggagcgatactcagaaatgtatcca
actagagatctcgtctatacggttggtgttagccagtaccagagagattggttctatgcg
cacgtcccaaggaaactgggtaacaaaagtgtaccaacaacatggagcattgtattcgaa
atcaaaaaaatactaccttctggaacttataaacttcgattagcacttgcatctgctact
tacgctgaattgcaggttcgtgtcaatgaccaaaaagcagcaaagcctctcttcacaact
ggtagaataggaaaagacaatgcaattgcaagacatggaattcacgggttgtactggtta
tatacagtcgacgttccaggaattctacttcgtccaggccagaatacaatatttctaaca
caaacaagaacttcaagcgcattttacggcttcatgtatgattatattcggttggaagga
cctccaagcaatgttgcgtag
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