Papaver somniferum (opium poppy): 113285580
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Entry
113285580 CDS
T05758
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00040
Pentose and glucuronate interconversions
psom01100
Metabolic pathways
Module
psom_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113285580
Enzymes [BR:
psom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
113285580
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
113285580
NCBI-ProteinID:
XP_026390198
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Position
6:complement(34583286..34587777)
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AA seq
411 aa
AA seq
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MGLLCTVLMICLLSIVQGEGILGSRSDFKKPDDTVFNVMDTGAAGNGRKNDTQAFLDAWR
QMCEATADSPTMVIPEGVTFLLYRISFEGPCKSANPHVQVSGKILAPTKRSWDGPIDYWI
QFSQVNGLVITGSNLSVIDGQGSDWWEHEDCFLDNANDACDRPTALKMSGCDGVEIRGLR
HVNSQRNHISLTDCRNVTVSGITIKAPKDSPNTDGIDISHSTNIRIEHSNIGTGDDCVAI
NGGCSDINITNVACGPGHGISIGSLGAKGATEEVERVRVQNCNFTDTLNGARIKTWQGGS
GCAKDIWFEQIKLERVHHPIVIDQYYCNGGHHCTEYPSAVKISDVMFNGIRGSSTNIVVV
SLNCSKTVACTNIIMNQIDIETIKSEATASSYCMNVIGEETDTSPHVSCLR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggggcttctatgcactgttttgatgatatgtttactaagcatagtgcaaggagaaggg
atccttggtagtagatctgactttaagaagccggatgatactgtcttcaatgtcatggat
actggtgccgctggaaatggccgaaagaacgatacccaagcattcctagacgcatggcgc
caaatgtgtgaagcaaccgcggactctccaaccatggtcataccagaaggagtgacgttt
ttgttgtatcgcataagcttcgaaggcccttgcaagtccgcaaatccacacgtgcaggtt
tcagggaaaattcttgcacctacaaagcgttcttgggatggaccgatagattattggatt
caattcagtcaagtgaatggtctcgtgattactgggtctaatttaagtgtaattgatggt
caaggttcagattggtgggagcacgaagactgttttctcgacaatgctaatgacgcctgc
gacaggccaacggcactaaaaatgtctggatgcgatggagttgagattagagggttgaga
catgtgaatagccagagaaaccacatctcgttgactgattgtagaaacgtaactgtctct
ggtatcaccataaaagctcccaaggacagtcctaatactgatggtattgacattagccat
tcaacaaatattcgaatcgaacattctaacatcggaactggtgatgattgtgtggcaatc
aatggcggatgctctgatatcaatatcactaatgtggcatgtggccccggacacggcata
agtattggaagtttaggagccaaaggagctactgaagaagtagaaagagtgcgtgttcag
aattgtaattttacagatactcttaacggagcaaggataaagacatggcagggaggttct
ggatgtgcaaaagacatatggtttgaacaaattaagcttgaacgagtacatcatcctatt
gtcattgatcaatactactgcaatggaggccatcactgcacggaatatccgtctgccgtt
aaaattagtgatgtaatgtttaatggaattcgaggatcttcgacaaatatcgtagttgta
agtttgaactgtagtaaaactgttgcctgcacaaacatcatcatgaaccaaattgatata
gaaacgataaaatctgaagccacagcctcatcttactgcatgaatgttataggagaggag
accgatacgtctccgcatgtttcttgtctacgatga
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