Papaver somniferum (opium poppy): 113285913
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Entry
113285913 CDS
T05758
Name
(RefSeq) exosome complex component RRP41 homolog
KO
K11600
exosome complex component RRP41
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113285913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113285913
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113285913
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
113285913
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF2863
Motif
Other DBs
NCBI-GeneID:
113285913
NCBI-ProteinID:
XP_026390437
LinkDB
All DBs
Position
6:95217187..95219474
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AA seq
168 aa
AA seq
DB search
MANFSTGDRMRKPKGDGRSTEISLVIRQTLEACIMTHLMPRSQIDVFVQVLQADGGTRPA
CINAATLALADAGIPMRDLATSCSAGYLNGTPLLDLNYVEDSAGGPDVSVGILSKMDKVT
LLQMDAKLLMETFETVMQLAVDGCKAIAEYIRKVLQENTKQLEYRRGV
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggctaactttagcactggagatcgaatgaggaaaccaaagggtgacgggcgatccacg
gagatatctcttgttatacgtcaaaccttggaagcttgcattatgacacacctaatgccc
cgttcccagatagacgttttcgtccaagttcttcaagctgatggaggaacaaggcccgcg
tgcataaatgctgcaaccttggcacttgcagatgctggaatcccaatgcgtgatctcgcc
acttcttgcagtgctggatatcttaacggcactcctttgctcgatttgaactacgttgaa
gatagcgcaggaggccctgacgtctctgttggaattctatccaagatggacaaagtgacc
ctacttcagatggatgcaaaactgcttatggagacctttgaaactgtaatgcaactcgcg
gtagatgggtgcaaggcaatagcagaatacatccgaaaagtactacaagaaaacaccaag
caactggagtatcgccgtggtgtttaa
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