Papaver somniferum (opium poppy): 113286448
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Entry
113286448 CDS
T05758
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113286448
03015 mRNA surveillance pathway
113286448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113286448
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113286448
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113286448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
113286448
NCBI-ProteinID:
XP_026390860
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All DBs
Position
1:51268706..51271437
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AA seq
497 aa
AA seq
DB search
MADDAKSSTDTIIEKPTEVNPAEVKPAEVKRAWADEVDDDDEEEQPTSSTSAEKQNIGSL
KIDENKNTEKFLDEPEEGNIKAVTGDTLYSTAATFEDLNLSEEILKGLYVDMKFTRPSKI
QSVSLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVKLRAPQALCICPTRELAIQN
IEVLNKMGKYTGLTSFCAIPVDRARDIPFNKRSPITDQIVVGTPGTIKKWMSAKKLSVGD
MKILVFDEADHMLAEDGFKDDSLRIMKDIRGSTPHCQVLLFSATFNETVKNFVSRVVKDG
NQMFVKKEELSLDVVKQYKVNCPDESAKIQVIKDKIFELGEKLGQSIIFVHTRKSADALH
KALADYGWQCTSIHGAIEKDHRDKIVKEFKDGLTQVLISTDLLARGFDQSQVNVVVNYDL
PVKYEYQSEPDYEVYLHRCGRAGRFGRRGAVFNLLCTQEEHMLMGKIENHFQNNIVEISD
WQNNNEFESALKAAGLI
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgctaagagcagcaccgacaccataattgagaaaccaactgaagtgaat
ccagctgaagtaaaacctgctgaagtaaaacgtgcttgggccgatgaagttgatgacgac
gacgaagaagaacaaccaacttcatcgacatcagctgaaaaacagaacatcggatcattg
aagatcgatgagaacaagaatactgagaaatttcttgatgaacctgaagagggcaacatt
aaagcggttactggtgatactttgtattcaacggctgcaacattcgaggatttgaatctg
tctgaggagatattgaaagggttatatgttgatatgaagtttacacgacctagtaagatt
caatctgttagtttaccaatgatcttgacgccaccgtataaggatcttatagctcaagct
cataatggttctggtaaaactacttgttttgtacttggaatgttgagtcgtgttgatgtg
aaactaagagctcctcaagcactttgtatttgccctaccagagaattagcaatccagaat
attgaagtccttaataaaatgggaaagtatacggggttaacctctttttgtgcgataccg
gtggatagagctagggatattccatttaataaacgatctccaattactgatcaaatagtt
gttggaactcctggtacaatcaagaagtggatgtcagctaagaagctcagcgtgggcgat
atgaagatactagttttcgatgaggctgatcacatgttagctgaggatggttttaaagat
gattctctcaggattatgaaggatattagaggaagcaccccacattgccaggttcttttg
ttttctgctacttttaacgagactgttaagaattttgtctcaagagtggttaaagatgga
aatcagatgtttgttaagaaagaagagctctcactggatgttgtcaaacagtataaagta
aattgtccagatgaatctgcaaagattcaagtcatcaaggataaaatttttgaactagga
gaaaaattgggacagtcgatcatatttgttcacacaaggaagagtgctgatgcgttgcat
aaagcactggcagattatggttggcagtgcacaagtatacatggtgccattgagaaagat
cacagagataaaattgtgaaggagtttaaagatgggttgactcaagtccttatatcaaca
gaccttcttgcacgaggttttgatcagtcacaggttaatgtggttgtgaactacgacctt
ccggtgaaatatgagtatcaatcagaaccagattatgaagtgtacttgcatcgatgcggt
agagcagggcgtttcggtcgcagaggagctgtgttcaatttactgtgtacgcaagaggag
catatgttgatggggaagattgagaatcatttccagaataatattgtggagatttctgat
tggcaaaacaacaatgagtttgagtcggctctgaaagcagctggtttgatatga
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