Papaver somniferum (opium poppy): 113286610
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Entry
113286610 CDS
T05758
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00040
Pentose and glucuronate interconversions
psom01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113286610
Enzymes [BR:
psom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
113286610
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
DAOA
Motif
Other DBs
NCBI-GeneID:
113286610
NCBI-ProteinID:
XP_026390956
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Position
6:66989..68874
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AA seq
442 aa
AA seq
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MKKNMNSTLLLLFFFSFAAVIPNLQANIGHFDPYVRKQAEDAAEYNRNHAYVQNPIETVN
HVNDHVHKVFAGRNSTKIERKLGKYHGPCLATNPIDRCWRCRADWANDRKRLADCVLGFG
RHTRGGKRGKFYVVTDPSDNDLVNPKPGTLRYGVIQTQPLWIIFARSMVIRLSEELMIAS
DKTIDGRGANVHITGGAGLTMQFVRNVIIHGLHIHDIHPGSGGLIRDSLDHYGFRTASDG
DGISIFGSSHIWIDHNSMSNCKDGIVDAIMGSTAITISNNHMTDHNEVMLFGASDGYSND
TIMQVTIAFNHFGRGLVQRMPRCRFGFFHVLNNDYTHWLMYAIGGSRNPTIISQGNRFIA
PPDTNAKEVTHRVFATEDVWKQWTWRSQNDLMMNGAFFVESGDITPSLPYSKQDMISSKP
GTFVTRLTRFAGAINCFVGKPC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaacatgaattctactttattacttttgtttttcttctcatttgctgcagtt
attccaaatttacaggctaatatcggccattttgacccgtatgtaagaaaacaagctgag
gacgctgcggagtataatcggaaccatgcttatgttcagaatcccatcgaaactgtcaac
catgttaacgatcacgtgcataaagtgtttgcggggcgtaacagcacaaagatagaaaga
aagttaggaaagtatcatggtccatgtttagcaacgaaccctattgaccgttgctggagg
tgcagggcagattgggcaaatgaccgtaagaggttagccgattgtgtccttggttttggc
cgacacactagaggtggaaagagagggaaattctacgtagtcactgatccatctgataat
gacttggtgaaccccaagccaggaacattgagatacggtgtaatccaaactcagccactc
tggatcattttcgcaagaagtatggttatcaggctgagcgaagagcttatgatagcaagc
gacaagacaattgacggtcgtggagcaaatgttcatatcacaggcggtgcaggccttact
atgcagtttgtgaggaacgtcatcattcatggtcttcacatccatgacattcatccagga
agcggtggcttaattagggactcacttgatcattatggattcagaacagctagtgatgga
gacggtatctctatctttggatcgtcgcacatttggatcgatcataactccatgtccaac
tgcaaggatggaatagtagatgccattatgggatccacggctattactatctcgaacaac
cacatgacagatcacaatgaggtgatgttgttcggtgcaagtgacggctactctaacgat
acaataatgcaagttacaatcgcgtttaaccactttggaaggggtttagtgcagagaatg
ccaaggtgcaggtttggatttttccatgtcctaaacaatgattacactcactggcttatg
tatgccattggtggtagtcgcaatcctaccatcatcagccagggtaacagattcattgct
cctcctgatacaaatgctaaggaggtgactcatagggttttcgcaacagaggacgtgtgg
aagcaatggacatggaggtcacaaaatgatttgatgatgaacggtgcattctttgttgaa
tctggcgacataactccatccttgccttattcaaagcaagatatgatcagttctaaacct
ggtacattcgtgaccagactaacacgtttcgcaggtgccataaactgttttgttggtaaa
ccttgctaa
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