Papaver somniferum (opium poppy): 113286656
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Entry
113286656 CDS
T05758
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
113286656
Enzymes [BR:
psom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
113286656
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
113286656
NCBI-ProteinID:
XP_026391005
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Position
6:2126348..2132512
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AA seq
706 aa
AA seq
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MNVHERKKAKEMKNSIDAYVHYPYSRTKKKNSGVMLWWMTFLSVLSLSITSVESLAAARN
LPPMANANVKGSNSGLKLLVQGKYVVMENSFVRVNLSNPDGLVTAVQYHGIDANLLEVRD
TEDSRGYWDVVWGEPGHKDYFDKLKATTFKVIVQNQNQIEVSFSWKWDISLKGKLAPMNL
DKRYIMLKDSSGFYTYGIFDHPKGFPEFSLAEARVAFKLSSAMFHHMTVSDTMQREMPAY
EDRQKGQPLAYPEAVLLTDPINPVHKGEVDDKYMYSVENKDTGVHGWISANPRVGFWIIT
ASNEFLVGGPHKQDLTSHAGPISLSIFFSSHYAGDELSPKFGNGEPWKKVFGPVFVYLNS
APPAEKDLYSALWKDAKTQLAKEVSSWPYSFPASVDFPAADQRGTVTGSLSVRDRYINRL
DIPGSSAYVGLAPPGEAGSWQRECKGYQFWTKANADGSFSIPNVRAGEYNLFAWVPGFVG
DFKHNTIIMISPGSNQNVGKLVYEPPRDGPTLWEIGVADRSAAEFRVPEPNKNLMNRLYV
DRGDWFRQYGTWEQYSQMYPITDLVFTIGVNQHQRDWFYAHVPRKLGNKYIPTTWSIVFK
IDQVLPSGTYKLRIAIASATYAELQVRVNDEKAVRPLFTTRTIGKDNAIARHGIHGLYWL
YTINVPGNLLHPGKNTIFLTQTRTSMPFNGFMYDYIRLEGPPTNVA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtacacgaaaggaaaaaggcaaaagagatgaagaactccattgatgcttacgtg
cattatccatattctaggacgaaaaagaaaaactcaggtgtgatgttatggtggatgaca
tttctttccgtcctttcattatctatcacatcggttgaaagtttggcagcagcaagaaac
cttccgcccatggcaaatgctaacgttaagggatcaaactctggactcaaattactggtt
caaggaaaatatgtagtgatggaaaacagttttgttcgagttaacctatccaaccccgat
ggtctagtaactgctgtacagtaccacggaatcgatgctaacttactcgaggttcgcgat
actgaagacagcagagggtactgggatgttgtgtggggagaaccaggacataaagattat
tttgataagttgaaagcaacaacttttaaggttatagtacaaaaccagaaccaaattgaa
gtttctttttcatggaaatgggatatttctcttaaaggaaaactcgctcctatgaatttg
gacaaaaggtacattatgctaaaagattcctccggtttctatacatacggcatttttgat
caccctaaaggattcccagaatttagccttgccgaagccagggttgctttcaagctcagc
tcagccatgttccaccacatgaccgtatcagatacaatgcaaagagagatgcccgcatat
gaggatcgtcaaaaaggtcaacctttggcctatcctgaagcagttctgttgacagatcca
atcaatccagttcataaaggagaggtagatgataagtacatgtattcagtcgagaacaaa
gatactggggtacatggatggattagtgcgaatccacgtgtaggattttggattataaca
gccagcaatgagttccttgttggaggccctcacaaacaggacctcacctcccatgcaggc
cctataagtctctctatattctttagtagccattacgctggagatgagctatctccaaaa
ttcggaaatggagaaccgtggaaaaaagtattcggtcctgttttcgtgtatcttaactca
gctcccccagcagaaaaagatctctattcagcactctggaaggatgcgaaaactcagttg
gccaaggaagtcagcagttggccttacagtttccctgcttcggttgactttcctgctgca
gatcaacggggtactgttacaggcagcttgtcagttcgggataggtacattaatcggctt
gacattcccggtagttctgcttatgttggtttggctcccccaggagaagctggatcttgg
caaagagaatgcaagggctatcagttttggactaaagccaacgcggatgggtcattttcg
attccaaatgttcgtgccggagaatataatctttttgcatgggttcctggttttgttgga
gattttaagcacaacactatcattatgatatccccaggatctaatcagaatgtgggtaag
cttgtttatgaacctccaagagatggtcctacattgtgggagataggagttgcagatcga
tcagcagcagaattccgagtccctgaacctaataaaaacctcatgaacagactgtatgtt
gatcgtggggactggttccgacagtatggaacgtgggagcaatactcacaaatgtatcca
attacagatctcgtcttcacaattggtgttaaccagcaccagagagattggttctatgca
cacgtaccaaggaaactaggtaacaaatatatccccacaacatggagcattgtattcaaa
atcgaccaagtcttgccatccggaacttataaacttcgaatagcaattgcgtctgctact
tacgctgaattacaggttcgggtcaacgacgagaaagcagtaaggcctctcttcacaacc
agaactataggaaaagacaatgcaattgcaagacacggaatccacggattgtactggtta
tatacaattaatgtaccaggaaacctacttcacccaggcaaaaacacaatattcctgaca
caaacaagaacttcaatgccattcaatggtttcatgtatgattacattcgcctggaagga
cctccaaccaatgttgcatag
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