Papaver somniferum (opium poppy): 113286657
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Entry
113286657 CDS
T05758
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
113286657
Enzymes [BR:
psom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
113286657
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
CarbopepD_reg_2
RhgB_N
Motif
Other DBs
NCBI-GeneID:
113286657
NCBI-ProteinID:
XP_026391006
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All DBs
Position
6:2175806..2179790
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AA seq
702 aa
AA seq
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MKKTNHSSMLRSITAILSVLLLSTTSVESLVAKNIQVNVAASGGLDTSLRHRKARSSSRG
DATAIGRSNSKLQLFVQERRVVLENNIVRVNLSNPEGLITAIQYKDIDGNLLDHGSAEDS
RGYWDVVWGDPGKNGTTDKLRTTTFKVIVQNENQIEVSFTRSWDTSLKGKVMPVNVDKRY
VMLKDSSGFYTYAIFERLKDWPELSIVEARIAVKLNEDKFHHMTITDTRQREMPAYQDRQ
KGQPLAYPEAVLLTDPVNPAHNGEVDDKYQYSTENKDTGVHGWISANPPIGLWMIAASNE
FRTGGPHKQDLTSHAGPISLAMFISSHYTGEDLAPKFENGEPWKKVFGPVFVYVNSAPEE
KRDVYSTLWEDAKSQLAKEIKSWPYSFPASADFPASDQRGTVTGSLLVRDRYVNQRDIAG
KSAYVGLALPGDVGSWQRECKGYQFWTTANADGSFSIQNVRAGEHNLFAWVPGFIGDFKH
NISIKISPGSKQNLGKLVYEPPRDGPTLWEIGFPDRSAAEFRVPEPNKKYMNRLYDNRED
WFRQYGTWERYSEMYPTRDLIYTIGVSQYQRDWFYAHVPRKLGNKSVPTTWSIVFKINKI
LPSGTYKLRLALASATYAELQVRVNDQKAAKPLFTTGRIGKDNAIARHGIHGLYWLYTVD
VPGNLLRPGQNTIFLTQTRTSSAFYGFMYDYIRLEGPPSNVA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagacaaaccatagttccatgttacggtcgataacggcaattctttccgtcctt
ttactgtctactacatccgtcgaaagtttggtcgctaagaacattcaagtaaatgttgcc
gcaagtggaggcttggatacttcattaaggcatcgaaaagctagatcttcatctcgggga
gatgctactgccattggaagatctaactctaaactccaattatttgttcaagaacgacgc
gtagtgttggagaacaacatagttagagtaaacttatcgaaccccgagggtctaataact
gcaatacagtacaaggacatcgatggtaacttactcgatcatggctccgcagaagatagc
agagggtactgggatgttgtgtggggtgacccagggaagaatgggacgacggacaagttg
agaacaacaacatttaaggttatagtacaaaatgagaaccaaatcgaagtttcatttacg
aggagttgggatacttctcttaaaggcaaagtcatgcctgttaatgtagataaaaggtat
gtaatgctgaaagattcttcgggtttctatacgtacgctatttttgaacgtttgaaagat
tggcccgagcttagcattgtagaagccaggattgcagtcaagctcaacgaagacaagttt
caccacatgaccataacagatacaaggcaaagagagatgcctgcgtaccaagatcgtcag
aaaggtcaacctttagcctatccggaagcagttcttttaacagatccagtcaatccagct
cataatggagaggtagatgataagtaccagtattcaactgagaacaaagatactggggta
catggatggattagtgcgaatccccccattggattatggatgattgcagccagtaatgag
ttccgcacaggtggccctcacaaacaggacctcacctcccatgcaggccctataagtctt
gctatgtttattagtagtcattacaccggagaagacctagcaccaaaatttgaaaatgga
gaaccatggaaaaaggtttttggcccggtttttgtctatgttaactcagctcctgaagag
aaaagggatgtctattcaacactttgggaggatgcaaagtctcagttggcgaaggaaatc
aaaagttggccttacagtttccctgcttccgctgactttcctgcctcagatcaaaggggt
accgttaccggaagcttgttagtccgggataggtacgttaaccagcgtgacattgctgga
aaatctgcttatgttggtttggctctcccaggagacgttggatcttggcaaagggaatgc
aagggttatcagttttggactacagccaacgctgatggatctttttcgatccaaaatgta
cgtgccggagaacataatctttttgcatgggttcctggttttattggagattttaagcac
aacattagcattaagatatccccaggatctaaacaaaatttgggtaagcttgtatatgaa
cctccaagagatggtcctacgttgtgggagataggctttcccgatcggtctgctgctgaa
ttccgagtacctgaacctaataaaaaatacatgaacagactgtatgataatcgtgaagat
tggttccgacagtatggtacatgggagcggtactcagaaatgtatccaactagagatctc
atctatacaattggtgttagccagtaccagagagattggttctatgcgcacgtcccaagg
aaacttggtaacaaaagtgtaccaacaacatggagcattgtgttcaaaatcaacaaaata
ctaccatctggaacttataaactccgattagcacttgcatctgctacttatgctgaatta
caggttcgtgtcaatgaccaaaaagcagcaaaacctctcttcacaactggaagaatagga
aaagacaatgcaattgcaagacatggaattcatgggttgtactggttatatacagtcgac
gtaccaggaaatctacttcgtccaggccagaatacaatatttctaacgcaaacaagaact
tctagcgcattttatggtttcatgtatgattatattcggttggaaggacctccaagcaat
gttgcatag
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