Papaver somniferum (opium poppy): 113286824
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Entry
113286824 CDS
T05758
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113286824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113286824
Spliceosome [BR:
psom03041
]
Complex A
Other components
Complex A specific factors
113286824
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
zf-CCHC
RRM_10
PHD_4
KH_PNO1_2nd
RRM_7
RRM_5
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
113286824
NCBI-ProteinID:
XP_026391235
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All DBs
Position
6:7039718..7043781
Genome browser
AA seq
746 aa
AA seq
DB search
MDSETLISSSAPPNQLDHHPDSETLAPPPETLATDPETANREEEQQQNQLVSQNGGGNSG
GGASEKDGSGGGEEETNSRRKRRSRWDPPTESENAESGTRKRKSRWADDDPKPVIQLPDF
MKEFTGTMDLDPEVQGLNIRLLEISRLLSSGLSLDDRPEGARSPSPEPIYDNMGVRINTR
EYRNRERLTKERSDIISQLIKRNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGP
RGNTQKRMEKETGAKIVIRGKGSIKEGRLQQKRDLKPDPAENEDLHVLVEADTQDALEAA
AGMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLCGEPGHRQYACPARTSTFK
SDVLCKICGDGGHPTIDCPMKGTTGKKMDDEYQNFLAELGGSGPESMTKPNSAVALLGAG
SNSSGSVPPWQSGNNSGGGGIGSATQPGLMTNGAKTGKDYDDTNLYIGYLPPNLDDDSLI
RLFQPFGDIVMAKVIKDRATNVSKGYGFVKYSDVAQANQAIASMNGYPLEGRVIAVRVAG
KPPPPAVPSGPPAHKMPTYPAQDQGGYASQQYSSGGPLPNAPHSGYMAAPVPWGPPPPYA
PYPPPPPGANMYNPVQGQSMPPYGAPYPPAHQTTPPGAAPSHSTASDGQQSFPPGVQSQN
TQPAPSSMYGMPPNPSYPPPNYPPPNYPSYYAVPPPPVSHSMGDHTQNVAAVPWASNPPA
PPPDSSAEQTSSGVEAEYEKFMGDLK
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggattccgaaaccctaatttcatcttctgctcccccgaatcaattagatcatcatcct
gattcagaaaccctagctcctcctccagaaaccctagctacagatcccgaaacagcaaat
cgagaagaagagcaacaacagaatcaattggtatctcaaaacggcggtggtaatagtggc
ggtggtgcgagtgagaaagatggttcaggaggtggtgaagaagaaacaaacagtagaagg
aaacgtcggagtagatgggatccaccgactgaatctgaaaacgctgaatctggaactcga
aagaggaaatctcgttgggcagatgatgatccaaaaccagtaattcaacttccagatttc
atgaaggaatttacaggtactatggatcttgatccagaagttcaaggtcttaatatacga
ttgttagaaattagtagattattatcatctggattatcattagatgaccgtcctgaaggt
gctcgttcaccgtcccctgaacctatttatgataatatgggtgttagaattaatactaga
gaatatcgtaatcgggaacgattgacaaaagaacggtccgatattatcagtcagctgatt
aaacgaaaccctgcgtttaagcctccagctgattaccgtcctcctaagcttcagaagaag
ttgtatatccctatgaaggagtatccagggtacaattttattggtcttatcattggtcca
aggggaaatacacagaagagaatggaaaaggagactggtgcaaagattgttatccgtggt
aagggttcgattaaggaaggaaggttacagcagaaacgtgatttgaaacccgatcctgct
gagaacgaagatttacatgtgttggttgaagctgacactcaggatgcacttgaggctgct
gcagggatggtggagaagttgttgcagccagttgatgaggtgcttaatgagcataagagg
cagcagctgagggaacttgctgctttgaatggaaccataagggatgaagaatattgtagg
ctgtgtggtgaacctggtcatcgtcagtatgcttgtcctgctcgtacctcaacttttaag
agtgatgttctctgtaaaatatgtggagacggaggtcatcctaccatcgattgtcccatg
aaaggcactactggaaagaaaatggatgatgaataccaaaatttcctggcagaattaggt
ggtagtggtcctgaatcaatgactaaaccaaattcagcagtagctcttctcggggctggg
tctaatagttcaggcagtgttcctccatggcaaagtggtaacaactccggaggtgggggt
attgggtctgcaacacaaccaggtttgatgacaaatggagccaagaccgggaaggattat
gatgatacaaatttgtacattgggtatctgccaccgaatcttgatgatgattcgttaatt
cgtctgttccaaccctttggcgatattgtgatggctaaggttatcaaggatcgggcgaca
aatgtaagcaaaggttatggttttgtgaagtattctgatgttgcacaggcgaatcaagct
attgctagtatgaatggctatcctctagaggggagagtgattgctgttagggttgcaggt
aaacctcctccgcctgcagtgccatctggacctccagctcacaagatgcctacttaccct
gctcaagatcagggaggatatgcttctcagcaatattcatctggtggacctcttccgaat
gcaccccatagtggctacatggcggcaccagttccttgggggccacctcctccttatgct
ccctatcccccaccacctcctggtgctaatatgtacaatcctgtgcaaggtcaatctatg
ccaccttatggtgcaccatatcctccagcacaccaaaccacacctcctggtgctgcacca
tctcatagtacagctagtgacgggcaacagagcttcccccctggtgttcaatcccaaaat
actcaacccgcaccttctagtatgtatggaatgcctccaaatccctcataccccccacca
aattaccccccaccaaattacccatcttattatgctgtgcctcctcctcctgtatcacat
tcaatgggtgaccatacacaaaacgtggctgctgttccttgggcctcaaatccaccagca
cctccacctgattcatctgccgagcagacatcttccggtgttgaggctgagtatgagaag
ttcatgggggatctgaaatga
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