Papaver somniferum (opium poppy): 113286854
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Entry
113286854 CDS
T05758
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113286854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113286854
Spliceosome [BR:
psom03041
]
Common components
Common spliceosomal components
SR proteins
113286854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
113286854
NCBI-ProteinID:
XP_026391268
LinkDB
All DBs
Position
6:complement(8087123..8089266)
Genome browser
AA seq
267 aa
AA seq
DB search
MSHFGRSGPPDIKDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA
FVRYKYPDEASKAVEKLDGRNVDGRDIMVQFAKYGPNAERISKGRVSEPVAKTRGSRERS
RSRSPRRSSRSRDEHRGRDSRRRSRSRSRERYDDRSRGRGRDSRHRSRTRSVSPDYRKGG
SRSRYEEERRRSRSKSAGSPSPVRRSPSPRKRSASPRRTPPRDESPDSRSHESPRKRSSS
PIPRSVSPQREPARSRSPSQQNSDADD
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactttggaagatctggtcctccagatatcaaggatacttactctcttcttgtt
cttaacatcaccttccgtactactgctgatgatcttttccctctatttgataagtacggc
aaagttgttgatattttcataccaagagatcgaaggactggagattctcgtggatttgct
ttcgttcgttacaaatatccagatgaagcttcaaaagctgttgaaaagcttgatggaagg
aatgttgatggaagggatattatggttcaatttgcaaagtatggtcccaatgctgaacgg
atctctaaaggacgagtaagtgaaccagtagcaaagactagagggagccgggaacggtct
agaagccgcagcccccgtcgaagttccaggtctcgtgacgagcataggggtcgagatagt
agaaggagaagtcgtagtaggagtcgggaacgatatgatgacagatctcgtgggaggggt
agagactcacgccaccgcagtaggacccgcagcgtaagtcctgattaccgaaagggtggt
agtcgaagtcgatatgaggaagagcgccgaaggagcagaagcaagtccgctggcagtccc
tctcctgttcggcgcagccctagtcccaggaaaaggagtgcatctcctcgcaggactcct
cctagggatgaaagccctgatagtcgcagtcatgaaagtcctagaaaaaggagctcatct
cctattcctagaagtgtttctccacagcgtgaacctgctcgttctcgtagcccatcacaa
cagaattctgatgctgatgactga
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