Papaver somniferum (opium poppy): 113286928
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Entry
113286928 CDS
T05758
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113286928
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113286928
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
Sec3_C_2
RICH
HOASN
Motif
Other DBs
NCBI-GeneID:
113286928
NCBI-ProteinID:
XP_026391356
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All DBs
Position
6:11819840..11822907
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AA seq
513 aa
AA seq
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MNSVFNEQILADKLSKLNNTQQCIETLSHWCIFHRMKAELVVATWEKQFHASEKAQKISF
LYLANDILQNSKRKGTEFVAEFWKVLPGALKDVHENGDDHGKTVVSRLVGIWEERRVFGS
RQSLKDLMLGKESLPPLELNKKRSRAVRIVKRDSRSIRTKLTVGGTAEKIVSAFHSVLSD
HPNEDLLMNNCKSAVHHVRKMEKDVDVACTKEGDPQRTTLANELQEEENVLKECIEKLKS
VEATRAALVSQLKEALHEQESELENVRTQLQGSLNSCISLNGKVAMAQSEEACNMRKRLN
NETDASSSADANSKSKTAASIAALVADKLTASTSSRQIMTSVLSSFAAQEAKGVGSVTTT
TSNGTKPNMEKHMAVMDSNVYITAQPPTAPTTPSYQTVVMHQPSPIQNQASTSQPLYHIM
TTQPSQQQYLQPPSGIMTGVTYSYGNLQPQQAPPQQAPPQPGPPQQQHMMNLAVAPYTQQ
QPTQLLQQPPVPPSFRPLQPPAMLYYTRQHQPQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgtattcaatgagcaaatacttgctgataagctctctaagctcaataacacc
caacagtgtattgagacactgtcacactggtgtatctttcaccggatgaaagcagaactt
gttgttgctacatgggaaaagcaattccatgcttcagagaaggcgcagaaaatttcgttc
ttatatctagccaatgatatacttcagaacagcaaacggaaaggaactgaatttgttgct
gagttttggaaggttcttcctggagcactcaaggatgttcatgagaatggagatgatcat
ggcaagactgtggtttccagattggttggaatttgggaagaaaggagggtatttggatct
cgtcagagtcttaaagatttaatgcttggaaaggaatccctgcctccgctagagttgaac
aaaaaacgctcccgtgctgttagaattgtaaaaagagattctcgctccataagaacaaaa
ctgaccgttggaggaactgctgagaaaatagtgtccgcgtttcactctgtgctgagtgac
catcccaatgaagacttgctgatgaacaattgcaagtcggctgtccaccatgtgagaaaa
atggagaaagatgttgatgttgcctgtacaaaagagggagatccgcagaggacaacttta
gccaatgagctacaggaggaagaaaacgttttgaaagaatgcattgagaaactaaagtca
gttgaagcaactagagcagccttggtatctcaattaaaagaagcattacatgagcaggag
tctgaactggagaatgtgcgcacacaactacagggctcattaaattcttgcatttcgttg
aatggtaaggtagctatggcccagtcagaagaagcctgtaacatgcgaaagcggctcaac
aatgaaacagatgcatcttcatcagccgatgcaaattcaaaatcaaaaacagctgcatcc
attgcagctttggttgcggacaaattaacagcttcaacctcatcacggcaaataatgact
tctgttctctcaagttttgccgcacaggaagcgaagggtgtaggttcagtaacgacaacc
acttctaatggaacaaagccaaatatggaaaaacacatggctgtaatggactcaaatgtt
tacatcactgcacaaccgcctaccgcccccacaactccttcctatcaaacagttgtaatg
catcaaccttcaccaatacaaaaccaagcttcaacgtcgcagcctctttatcacataatg
acaacccagccttctcaacagcaataccttcaaccacctagtgggattatgactggagtg
acgtattcttacggcaatttacaaccacaacaagcgccaccacaacaagcacctcctcag
ccaggtccaccgcagcagcaacacatgatgaaccttgcagttgcaccgtatacacaacag
caaccaacacagctattacagcaacccccagtgcctcctagctttcggccccttcaacct
cctgcaatgttgtactacactaggcaacatcagcctcagtga
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