Papaver somniferum (opium poppy): 113286954
Help
Entry
113286954 CDS
T05758
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113286954
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
90S particles
Other 90S particles
113286954
Pre-60S particles
Other pre-60S particles
113286954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
113286954
NCBI-ProteinID:
XP_026391394
LinkDB
All DBs
Position
6:complement(12771338..12777522)
Genome browser
AA seq
1150 aa
AA seq
DB search
MEDEHMLDLDQEEGGVPTLNLDANSDLCEELMKRYGKSGAIQHRHLCASASAMRIVLKEE
GLPLTPLSYFAATISAIDDTVSSFSSSSENSSSSFDSKATSSLTSFLSILLPLIPYESLP
SSKANDAVTVLVSLLKIPKVAQSPATIRSVIKSLGFLIKLCDFEAWNFGKSIFEMILEFS
IDKRPKVRKCAQVCVEEIYKSVQCTNVVNEASDLFYSTMFYKYLPFAIAIAWSKVEITKD
SELAEELKLMESVHMLSVLKIIVLYLSNDVVSKVMSQFHKVMGCKYSLLTRHNFAFLEVI
LEFSKVEEIVVPKTEIIIFGLGNYVSPKESNPADTILAACVLLKKCIDKLYAADKRNIWV
INLPLVFEPIAGVVGAGLSVSGDAVGILKEVVNQHIDDGLKTSASNGTLASDDDKLKGTP
ESKALQSICDAVFMMRLTNSDGELNENILAVISNVFVKLGELSYFYLKDVVHKLAELLRV
ANGDTTRSKYQHLEECFGSAVIAMGPEKILTLLPVSFDEEELTSLNIWILPILKKYVIGS
SLEYYMDHIIPLVEPLKQACKTVTKSRVRKKLQAAIRAFWDLLPAFCRYPTDTHKKFKAL
SKLLLRFIKEEESMHENVCLALQQLVNQNRSIVKSTQGLEDSSEQPTTSTINESIAESRN
VPAHYTKKVAKKNIKALASRSVDLLQALTDVFLDSPLEKRKYLKEAIGCLASITEIIEVK
KIFISLLEKIQSKSGTEISGELENQGGNMKVDEQEAQRCVIMEFASALLIGASEDLVDII
FDYITPALQDEGIVLYSAYCTLSKIFEEHSWFYSSRFDEMLSHLLGLKLPDDIMGLRSRF
ACLHTLFVYLLKSNSEETHAKAFLILNEIILALKDSKEDARKAAYDVLLKISCSLKSLSS
PNLESPHAKLLNMIAGYLSGASPSIMSGAVAALSLLIYNESDICASAPEVVPSVLALLKS
KAKEVIKTVLGFVKVLVSTLQASDLQNLLPDIVQGILPWSSVSRSHFREKVTVILEILIR
KCGATSVEIDVPEKYMKYFKTVKEQRRGKNSSDKDENVDKVDNPDSSTAGRHKRVHRELS
NTSQNETPAKKHKFDTPNRNNSHKASGKGSQFFQKSDRAQSHSQKGRRPASTSKANQHKK
GSFRGRQSAK
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgagcatatgttagacctagaccaagaagaaggtggagttccaacactcaac
ctagatgcaaactcagacctatgtgaagaattaatgaaacgttatggcaaatcaggagca
atacaacaccgccatctctgtgcatcagcttcagctatgagaatagtactcaaagaagaa
ggtttacctctaactccactatcttatttcgccgctactatctccgccatagacgacaca
gtctcttccttctcctcatcatctgaaaattcttcttcatcatttgattccaaagctact
tcttcacttacttcgtttctgtcaatcttacttcctttaattccatatgaatcgttacct
tcttcgaaagctaatgatgctgttactgttcttgtttcgttgttgaaaatacctaaagtt
gctcaatcaccagctacgattcgttctgtgattaaatcgttagggtttttgattaaactg
tgtgattttgaagcttggaattttggtaaatcgattttcgagatgattttggagttttca
attgataaacggccgaaagtgaggaaatgtgcacaagtctgtgttgaggagatttataaa
tctgttcaatgtactaacgttgtgaatgaggcgagtgacttgttttattcgacgatgttt
tacaagtacttgccgtttgcaatagctatagcatggtctaaggttgaaattacaaaggat
tcggaactggcggaggagttgaagctgatggagtctgtacatatgttgagtgtgcttaag
ataattgtgctgtatttgtcgaatgatgttgtttcgaaagttatgtcgcagtttcataag
gtcatgggttgtaagtattcattacttactagacataattttgcttttcttgaagtaatt
ttggagttttcgaaggtggaggaaattgttgttccgaagacggagattatcatctttggg
cttgggaactatgtatcgcctaaagagagtaacccggctgatactatattggctgcgtgt
gttttgttgaaaaagtgtattgacaagctttatgccgccgataagcggaacatttgggta
ataaatcttccattggtgtttgaacctatagcgggtgttgtaggcgctggtcttagtgtt
tctggagatgccgttggtatcttgaaagaagtggtaaatcaacacattgatgatggccta
aagacttctgcgtcaaatggaactcttgcaagtgatgatgataaactcaagggtacacca
gaatccaaggcactgcaatcgatttgtgatgcggtttttatgatgcggcttactaactct
gatggggagcttaatgagaacatcttggcagtaatatcgaatgtgttcgtaaagctaggt
gagttgtcatacttctatttgaaagatgttgtccataaacttgcagaactactaagagtt
gcaaacggagacacgaccaggtcaaagtaccaacaccttgaagagtgctttgggtctgct
gtcatcgctatggggccagagaagatcctgacattactacccgtttccttcgatgaagaa
gagctcaccagtttaaacatctggattctgcctattttaaaaaagtatgttattggatca
tcattggagtattatatggatcacattatccccctagtggaacctcttaagcaagcctgt
aaaacagtaacgaagtctcgtgttaggaagaagctgcaggctgccatccgtgcattctgg
gacttgttacctgctttctgtcgctatcctacagatactcacaagaaatttaaagctctg
tccaagcttcttttacgttttatcaaggaagaagaatctatgcatgaaaatgtatgctta
gctctgcagcaacttgtgaaccaaaatagaagtatagttaaatctactcaaggcttagaa
gactcctctgaacaaccaactacttccaccatcaatgagtcaatagctgaatctcggaat
gtacccgctcattacacaaagaaagttgcgaaaaagaatatcaaggctttggcatcacgc
tctgttgatttgcttcaggctcttactgatgtatttttggattctcctctagagaaacgc
aaatatttgaaggaggcaattggatgcttggcatctatcactgaaatcatagaagtaaaa
aagattttcatttcgttattagagaagatccagtccaaatctggaactgaaatatcaggg
gaattagagaatcaaggaggaaacatgaaggtagacgagcaggaagcacaaaggtgcgtg
ataatggagtttgcatcagcacttcttataggagctagtgaggatcttgtagatataatt
ttcgactatataacacctgcattgcaagatgaggggattgttctgtactcagcttattgt
actttgagcaaaatatttgaggagcattcttggttttactcatccagatttgatgaaatg
ctgagtcatttgcttggtctcaagttacctgatgatatcatgggtctaagaagtcgcttt
gcatgtttgcacactttgtttgtgtacttattaaagagtaattcagaggagacccatgca
aaagcttttctaattctcaatgagattatactcgcattgaaggattccaaggaagacgca
agaaaagcagcttacgatgtgctactgaagataagctgcagcttgaaaagtttatcctct
ccaaatctcgagtcacctcacgcaaaacttcttaatatgatagctggctatctttctggt
gcatctccttccataatgagtggagcagttgcagctctttcgctgctgatatacaacgag
agcgacatttgtgcttctgcacctgaagtagttccatctgttttagctttgctgaaaagc
aaagccaaggaagttataaaaacagttctgggctttgtgaaagttcttgtatccactttg
caggcaagcgacctgcaaaatcttttaccagatattgttcagggtattcttccgtggtca
tctgtatcgagaagtcatttcagagaaaaggttaccgtcatactggaaatccttattcgg
aaatgcggtgctacatcagttgagatagacgttccagagaaatatatgaaatatttcaag
accgtcaaggagcaacgccggggaaagaacagctctgacaaagatgagaatgttgacaag
gttgataatcccgattcctctacagcagggaggcataagagggtgcacagagagttatct
aacacaagtcagaacgagacaccagccaaaaaacataaattcgacacacccaacagaaat
aactctcacaaagcttctggtaaaggatcccagtttttccagaaatctgatcgcgcacaa
tcacattcacagaagggtcgaagacctgcatcgacttccaaagccaatcagcacaagaaa
ggatcatttaggggacgccaaagtgctaaataa
DBGET
integrated database retrieval system