Papaver somniferum (opium poppy): 113286982
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Entry
113286982 CDS
T05758
Name
(RefSeq) transcription initiation factor IIB-2-like isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113286982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113286982
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
113286982
Prokaryotic type
Archaeal type
TFB
113286982
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
WHD_GDS1
DUF7573
Motif
Other DBs
NCBI-GeneID:
113286982
NCBI-ProteinID:
XP_026391423
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All DBs
Position
6:complement(14171449..14175753)
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AA seq
348 aa
AA seq
DB search
MDAFCSDCKRNTEVVFDHSAGDTVCSECGLVLEAHSIDETSEWRTFANESGDNDPNRVGG
PSNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRTLMQPFKTIATMSDRLGL
VATIKDRANEIYKKVEDQKSIRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATKK
EIGRAKEYIVKQMESDPDPSVPFSVNPVHAVDFLRRFCSHLGMTNQAVKAAQEAVQKSEE
LDIRRSPISVAAAVIYMITQLSAEKKLLRGLRSNKHLFFSVTSSIYCCCYSLYGVIIHSS
NHWCADISMATGVAEGTIRNSYKDLYPYAVRLIPTWYAKEELRNLCSP
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatgcattttgctcagactgtaaaagaaacacagaggtagtgtttgaccactctgcc
ggggacacagtttgttcggaatgcgggcttgtcttggaagctcactccatcgatgagaca
tctgaatggaggacctttgcaaatgagtctggtgataatgaccccaatcgtgttggtggt
ccatcgaaccctctcctcacggatggtggtctttccactgtaatttcaaagccgaatggt
gcttctggtgattttctgtcatcctctctaggacgttggcagaatcggggttcaaatcct
gatcggacgcttatgcaaccattcaaaaccatcgctaccatgtctgacagactgggcctt
gttgcaaccataaaggacagagcgaatgagatatataagaaagtggaagatcagaagtcg
attagaggaagaaatcaagatgcaattttggcagcatgcctgtatatagcttgtcgtcaa
gaggataaacctcgcacagtgaaggaaatttgctctgttgccaatggagcaacaaagaag
gaaatagggcgcgcgaaagagtacatcgtgaaacaaatggagtcagatccggacccgtcg
gttccgttttctgtaaaccctgtacatgctgtagactttttgaggcgtttctgttcccat
cttggcatgaccaaccaagctgttaaagctgcccaagaagcagttcaaaagtcggaagag
cttgacataaggaggagccctatttcagtagctgctgctgtcatttacatgataacccag
ctatctgctgagaagaaactactccgaggtttgagaagcaacaaacacttgtttttctct
gttacttctagcatatattgttgctgttactctctttatggggttattattcattcctca
aatcattggtgtgcagatatatccatggcaactggagttgccgagggaaccattaggaac
tcatataaggatctctatccttacgctgttaggttaatacctacctggtacgcaaaagag
gagctgaggaacttatgcagcccttga
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