Papaver somniferum (opium poppy): 113286990
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Entry
113286990 CDS
T05758
Name
(RefSeq) elongator complex protein 1-like isoform X1
KO
K11373
elongator complex protein 1
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113286990
Transfer RNA biogenesis [BR:
psom03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
113286990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
Beta-prop_WDR19_1st
Beta-prop_HPS5
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
113286990
NCBI-ProteinID:
XP_026391434
LinkDB
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Position
6:complement(14313512..14319237)
Genome browser
AA seq
1334 aa
AA seq
DB search
MKNLKLYSEITSQIQLQSKDEVLTHSAFDIERNRLFFASSENIVYISQIPSTQEWQKTSV
AEIEHIELESGDTITALDYLMEKEALVLGTSNGDLLLHVEDNHVTEVVGQVDGGVKTIAP
SPDGALLAVITGFGQILVMTHDWDVLYETTLDDLPDDADIDGELNGGSGQQFENPVSWRG
DGRYFATLNGTNSSSSLHKKLKIWERDSGVLEATSETKAFMGGALDWMPSGAKVATARDR
KVENKCPLIVFYERNGLERNSFSIEDRLDGSVESLKWNCNSDLLATVFRCEAYDCVKVWS
FSNNHWYLKQEMRYLKDDKVKIIWDPTKPFSLICWTTGGKITAYNFVWVTSVMEDSTAFV
IDNSKILVSPLALSLIPPPMCLFSLKFQSPVCSMAYFSKNSRNLLAACLSDGSFCVVELP
SSDTWEELEGKEFSVEASSSEAAFQSLRHLVWLDSNILLGVSYHGPARDQLAVSSGENGH
LHPQGVNHSLTCSLQEIELVCSENRAPDMVSSSGWNAKVVNQISPEGSVIGIAPNPAKPG
SALIQLDGGAVIEYASKMGVSRGQLGQHQQKLDRNVGFSSSCPWMNVVPVLDSGVLKSLL
FGLDSNCRLHISGKVLCNNCSSFSFYSNSTDQLITHLVLTTVQDLLFVINMDDVLHGDAD
VKYENFIRVVSKRKEEKKNSINIWERGAKLVGALHGDEAALIIQTIRGNLECIYPRKLVL
ESIVNALVQRRFKDALLLVRRHRIDFNVIVDYCGWKAFLQSAKEFVQQVDNLSHITDFIC
SIKNENVMETLYKDSLSQPHPKGTNDTPVTEQSAFDAKDKVSSVLLAVRNALEEHVPESP
ARELCILTTLSRSEPALLEEALKRIKVIREMELSGLDDPRRKSYPSAEEALKHLLWLSDA
EAVYEAALGLYDLHLTAIVALNSQRDPKEFLPFLQELERMQPAIMQYTIDLKLRRYENAL
KHIVSAGDAFYEDSMNLMKSNPQLFPLGLKLFAQSPKRSQVLEAWGDHLNDEKFFEDAAA
IYLCCPSLEKALKAYRGCGNWKGVLTVAGRLNLGEIEVTKLATELCEELEELGKPAEAAK
VALEYCNDVVSSVGYFVTAREWEEALRVGFMHRRDDLISQVKSAADECANTLVVEYEEGL
EKVGKYLIRYLAVRQRRLVLAAQLQLADKTIDDIDDDAASETSSNFSGMSAYTKGSTRKG
SSASVSSNATSRKRDTRRQKHRGGTIRAGSPGEELALVDHIKSMALTTGGQHELKSLIVS
LLTVGEEDTARKLQRAGDTFQVSQMAAVKLAEDTMSNDNMDEKTHTLENYIHKVRGELPI
SDTISWRSKVLLPP
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacttaaaattatattcagaaatcacatctcaaatccagttacaatctaaagat
gaagtgctcacacactccgcattcgatatcgagagaaaccgtctcttctttgcttcttct
gaaaacattgtttacatttctcagattccctctactcaggaatggcaaaagacatcagta
gctgaaattgaacacattgaattagaatcaggggatactataacagcacttgattatctt
atggagaaagaagcacttgtattagggacttcaaatggtgatttgttgttacatgttgaa
gataaccatgttactgaggttgttggtcaagttgatggtggtgttaaaactattgctcct
agtccggatggtgcacttcttgctgttattactggtttcggacagattttggttatgact
catgattgggatgttttgtatgagactactcttgatgatcttcccgatgatgccgacatc
gacggtgaacttaatggtggttctggtcagcagtttgagaatcctgtatcttggcgaggt
gatgggagatattttgctactctgaatggaacgaattcgtcttcttcattgcacaagaag
cttaagatatgggaacgggattccggggtgttggaggctacatctgaaactaaggctttt
atgggaggagcgttggattggatgcctagtggggcaaaagtggctactgcacgtgataga
aaggttgagaataagtgtccgttgattgttttctatgagaggaatgggttagaaagaaat
tcttttagtattgaggaccgattagatggatcagtggaaagcctgaagtggaattgcaac
tctgatcttctggcaactgttttcagatgtgaagcatatgattgtgtgaaggtgtggtct
tttagcaacaaccactggtacttgaaacaggaaatgagatacttgaaggatgataaagtg
aagattatatgggatccaaccaaaccgttctctttgatttgttggacaactggtggcaag
atcacggcctataactttgtttgggtgacatcggtcatggaagactctacagcctttgtc
attgataactccaagatattagtgtcgccgcttgctttatctctaataccaccacccatg
tgtttattcagcctgaaattccagagccctgtttgcagtatggcttacttttcaaaaaac
tcaaggaatcttttggctgcatgtttatctgatggaagtttttgtgttgtggagcttcct
agttctgatacttgggaagagttggaaggcaaagaattcagtgtcgaggcttccagttct
gaagccgcatttcagtccttgagacatctcgtttggttggattcaaatattctccttggt
gtttcttatcacgggcctgctcgtgaccagttggcagtttcatccggtgaaaatgggcat
cttcatccccagggagtcaaccattctctgacatgtagtttgcaagagattgaactcgtg
tgttcagagaatcgtgcacctgatatggtgtcctcttcgggttggaatgccaaggttgtt
aatcaaatctctcctgaaggttcagtaattggaattgccccaaaccctgctaaaccaggc
tctgctttgattcaactcgatgggggcgcagttattgagtacgcttccaagatgggtgtc
agcaggggacagttgggtcagcatcaacagaagcttgatcgtaatgttgggttctcatct
tcgtgcccttggatgaatgtggttccagttcttgacagtggggtcttgaaatctttgctg
tttgggctagatagtaattgcaggctgcatattagcgggaaagtgttgtgtaacaattgt
agcagcttctcgttttactcaaactccaccgaccagctgataacacatttggttcttacc
accgtccaagatttgctcttcgttattaacatggatgacgtattgcatggagatgcagat
gttaaatatgaaaattttatccgcgttgtaagcaaaaggaaagaagaaaagaaaaactcc
ataaatatatgggaaagaggtgcgaaattggttggggctctacatggtgatgaggctgct
ctcattatacaaaccattcgtggaaatttagaatgcatttatccaagaaaactggtcctg
gagtcgattgttaatgctttggtccaaagacgtttcaaagatgctcttttattagtgaga
aggcatcggattgatttcaatgtaattgttgactactgtggttggaaagcattcctccaa
tcagctaaagaatttgtacagcaggtagataacttgagccacatcactgatttcatctgt
tccataaagaatgaaaatgttatggagacactgtacaaagacagtctatcccaacctcat
cccaagggcacaaacgatactcctgttaccgagcagagtgcctttgatgcgaaagacaaa
gtttcttccgtcttgcttgctgtaaggaatgctcttgaggagcatgtaccagagagtcct
gctagggaactttgcatattaactactttatctcgcagtgaacctgctcttctcgaagaa
gccctaaagaggataaaggttattcgtgaaatggaactttcggggcttgacgatcctcgt
cgcaaaagttacccttctgctgaagaagctctcaagcatctcttgtggttatcagatgct
gaggctgtttatgaagctgctttaggtctttatgatctgcaccttacagccattgtggcg
ttgaattctcaaagggatccaaaggagtttcttccatttctccaggaactagagcgtatg
caaccagcaatcatgcaatatacaattgatcttaaactgcgtaggtatgagaatgctctt
aaacatatagtttcagctggtgatgctttctatgaagatagcatgaacctaatgaagagt
aatcctcaacttttcccactgggacttaaactgtttgcccaaagtccaaagagaagccag
gtccttgaggcctggggagatcaccttaatgacgaaaaattctttgaggacgcggctgca
atttatctgtgttgtccttctttagaaaaagctttgaaggcataccgaggttgtggtaat
tggaaaggagtgcttactgtggctggtcgtctcaacctgggagaaattgaggtaacaaaa
ctggcgactgagctttgtgaggaacttgaagaactaggaaagccagcggaggctgccaaa
gttgctttggaatactgtaatgatgttgtcagctcagtagggtattttgttactgcacgt
gaatgggaggaggctctcagggttgggtttatgcatagaagggacgatctgatttcacaa
gtcaagagtgcagctgatgaatgtgccaacactttggtagtcgaatatgaagaaggattg
gagaaagtggggaagtacttaattcgctacttagctgttcgacaaaggaggttagtcctt
gcagctcaacttcaattggcagataagacaatagatgatattgacgatgatgctgcttcc
gagactagcagtaatttcagtgggatgagtgcttatacaaaagggagcacaaggaagggc
tctagtgcttctgtaagttcaaatgcaacaagcaggaaaagagatacgaggcgccagaag
cacaggggaggaacaatacgtgctggcagcccaggggaggagttagccctagtggatcac
ataaagagcatggcattaaccactggtggccagcacgagcttaaatctttgatagttagc
ctattgacggtgggcgaagaagatacagctcgaaagctgcagcgtgcaggagatactttt
caagtatctcaaatggcagcagtcaaacttgctgaagatacaatgtccaatgacaacatg
gatgagaaaacccatacactagaaaattacatacacaaagtacgaggtgaattgcctata
tctgacacgatctcatggcggtctaaagtattgcttcccccttaa
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