KEGG   Papaver somniferum (opium poppy): 113287053
Entry
113287053         CDS       T05758                                 
Name
(RefSeq) ras-related protein Rab7-like isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom04144  Endocytosis
psom04145  Phagosome
psom04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:psom00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    113287053
   04145 Phagosome
    113287053
   04148 Efferocytosis
    113287053
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:psom04131]
    113287053
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psom04147]
    113287053
   04031 GTP-binding proteins [BR:psom04031]
    113287053
Membrane trafficking [BR:psom04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    113287053
Exosome [BR:psom04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113287053
  Exosomal proteins of other body fluids (saliva and urine)
   113287053
  Exosomal proteins of colorectal cancer cells
   113287053
  Exosomal proteins of bladder cancer cells
   113287053
GTP-binding proteins [BR:psom04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    113287053
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU ATP_bind_1 RsgA_GTPase cobW AAA_16 Septin nSTAND3 AAA_7 AAA_22 NTPase_1 AAA_24 PduV-EutP DAP3 NACHT nSTAND1 AAA_5 ATPase_2 AIG1 NB-ARC Sigma54_activat MCM
Other DBs
NCBI-GeneID: 113287053
NCBI-ProteinID: XP_026391498
LinkDB
Position
6:16871371..16874132
AA seq 207 aa
MSLVRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVQLDDRIVTL
QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVQKSFDNLNNWREEFLKQASPANPDKFP
FILLGNKVDIDGGNSRVVSEKKAKEWSSSRGDIPYFETSAKEDQNVDVAFQCVAKTSLAN
DQLQDIYFNPIPDEVPIERNGGGGCAC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgtctctagtgaggagaagaactttgctgaaggttattgttcttggagatagtggggtg
ggaaagacatcattgatgaatcaatatgttcataagaaatttagtcaacaatacaaagca
acgataggtgctgattttgtaaccaaagaagtgcagcttgatgacaggattgtaacactt
cagatttgggacacggctggacaagagagatttcaaagtcttggtgttgcgttttataga
ggggcagattgttgtgttctagtttacgatgttaatgtacagaaatcatttgataatctt
aacaattggcgcgaggagtttcttaagcaggcaagcccggccaatcctgacaaattccca
ttcattttacttgggaacaaggtcgatatagatggaggaaacagccgagtggtttctgaa
aagaaggctaaggagtggagctcatccagaggtgacattccctacttcgagacctcagct
aaagaggatcagaacgtggatgttgcatttcaatgtgttgcaaagacttcacttgccaat
gaccaactgcaggatatatacttcaatcccatcccagatgaagtcccaatcgagcgaaat
ggaggtggaggctgcgcttgttag

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