Papaver somniferum (opium poppy): 113287127
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Entry
113287127 CDS
T05758
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113287127
Spliceosome [BR:
psom03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113287127
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Ortholog
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Phage_tail_terminator_5
Motif
Other DBs
NCBI-GeneID:
113287127
NCBI-ProteinID:
XP_026391592
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All DBs
Position
6:complement(19418270..19423658)
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AA seq
448 aa
AA seq
DB search
MTEPSKVIHVRNVGHEIAENDLLQLVQPFGVVTKLVMLRAKNQALLQMQDVAAAVDVIQY
FTNVQPSVRGRNVYIQFSSHQELTTMDQNGQGRKSSEQETEPNRILLVSIHHLLYPITVE
VLHQVFSPHGYVEKIVTFQKSAGSQALIQFQTRQSAVAARTALQGRNIYDGCCQLDVQFS
NLSELQVNFNNERSRDYTNPSLPTEQKGRSSQPNYAEGGLYGAQPSGARPGGYPQMGNAA
AVAAAFGGGLPPGISGTNERCTVLVSNLDPDRIDEDKLFNLFSIYGNIARIKLLRNKPDH
ALVQMGDGFQAELAVHFLKGAMLFEKRMEVNFSKHPTITAAPDTHEYQNSNLNRFNRNAA
KNYRYCCSPTKIIHLSTLPQEITEEEIVCHLEEHGTIVNTKLFEVNGKKQALIMFETEEQ
ATEALVCKHATTIDRSVIRISFSQLQNI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccttctaaggtcattcatgttcgtaatgtaggccacgaaatagcggagaat
gatttgcttcaattagtacagccatttggtgttgttactaagcttgttatgttaagggct
aaaaatcaggcacttcttcagatgcaagatgtggcagctgctgttgatgtgatacagtac
ttcactaatgttcagcctagtgtcagagggaggaatgtttacattcaattctcttcacat
caagaattgacgacaatggatcagaatggtcaaggacgcaagagcagtgaacaggaaaca
gaacccaatcgaattctattagtatcaattcatcacctgctctatcctataacggtggaa
gtgctgcatcaagtgttttctcctcatgggtatgtggagaagatcgtcacgtttcagaag
tcagctggttctcaagcccttatacaatttcaaacacgccagagtgctgttgctgcaagg
acagctctccaaggacgcaatatttatgatggttgttgtcagctggatgttcagttctca
aacctcagtgagttacaagtaaacttcaacaacgagcgctctagggattacaccaaccca
tctttgcctactgaacaaaaaggcagatcctcccagcctaactatgctgagggaggttta
tatggtgcacaaccttctggagctaggccaggtggatatccacagatgggaaatgcagca
gctgtagcagctgcatttggaggcgggttgcctcctggtattagcggtaccaatgaacga
tgcacagtcttggtttccaaccttgatcccgatagaattgatgaggataagctcttcaac
ctgttctccatttatggaaacatcgcgagaatcaaacttctccgcaacaaaccagatcat
gcccttgttcagatgggtgatggatttcaagctgaattggccgtacacttcttgaaggga
gccatgctgtttgaaaagcgtatggaggtgaacttttcaaagcatccaactattactgca
gcacctgacacgcatgagtaccagaattcgaacctgaatcggttcaatcgcaatgcagca
aagaattaccgttactgctgttccccaaccaagattatccacttgtccacccttcctcaa
gaaattactgaggaagaaattgtctgccacctcgaggagcatggaaccatagtgaacacc
aagctttttgaagtgaatggcaaaaaacaggcccttatcatgtttgaaacagaggagcag
gctactgaggctcttgtgtgcaagcacgcaacaaccatagatcgttcagtcatccggatc
tccttctcccagctgcagaacatctaa
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