Papaver somniferum (opium poppy): 113287180
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Entry
113287180 CDS
T05758
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113287180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113287180
Spliceosome [BR:
psom03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
113287180
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
113287180
NCBI-ProteinID:
XP_026391642
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Position
6:complement(23541776..23546035)
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AA seq
796 aa
AA seq
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MDRVSSRKSRDEKERESSHHSDNHRDRDRYRDHKHRSSTDVSDSASHKRKERGEESEERY
EKRVRAEKRERRKFEDKDAEDRDLNGTYKESRNYDEEDNSNNNNNNNNNNNNNNNNRVEK
RERRRFGDKTEDRERMGGDNVQSNVSTNGSGSIAAANGASLEPHQMTSRIGQDHPPPSKV
SSISTTNENKGVNITRSHEVPGKSSTDGTTSSAATKSGNLSLGALEKAKKALQMQKQLSE
KLKKIPQLKKVTTPSSDSTLSMGLNKEVDKAPVSSVPPPTATLVSPQPGNATVSVGGVSS
LPGLANVPNIEAVKRAQELAAKMGFHQDPEFAPLINMFPGQMPVEIAIQQKPPKAPVLRL
DAHGREVDEHGNVVNQPKLTNLSTLKVNINKQKKDAFQILKPELEVDPESNPHYDERMGI
NKAKLLRPKRMNFQFVEEGVWSKQAEIIKFKSQFGEAQAKELKTKQAQLAKAKAEPDINP
NLIEVSERVIIKEKPKDPIPKVEWWDVVLLPSGNYGDISGDSITEDELKMDKITIYVEHP
LPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLLEPPKSKVKMSNL
MKVLGSEATQDPTRLEMEIRSAAAEREQAHVDRNIARKLTPAERREKKEKKLFDDPNTLE
TIVSVYKINDLSHRQTRFKVDVNAQENRLTGCLVITDDITVVVVEGGNKSIKRYGKLMLK
RINWAESVRNEEEDMDEDNDKPVNKCVLVWQGSVAKSSFNRFAVHECRTEAAARKYFADA
GVGHYWDLSVNFADES
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggatagggtatcaagcagaaaatccagagacgaaaaagagagagaatcaagtcaccac
agtgataatcatcgcgatcgcgatcgatatcgtgatcataagcaccgaagtagtacagat
gtgagtgattctgcttctcataaaaggaaagaaagaggcgaagaaagtgaagaacgatac
gagaaaagagttagggctgaaaaaagagagagaaggaagtttgaagataaggatgccgaa
gacagggatttgaatggaacttataaagaaagtagaaattatgatgaagaagataatagt
aataataataataataataataataataataataataataataataatagagtggagaaa
agggaacgaagaagatttggggataaaactgaagacagggaacggatgggtggtgataat
gttcagagtaatgtttctaccaacgggagcggttccattgctgctgctaatggtgcatct
ctggaaccacaccagatgacatcaaggattggccaggatcacccccctccttccaaggta
tcttcaatttctacaaccaatgaaaataagggagttaatattaccagatctcatgaggtt
cctggaaaatctagtacagatgggacaacatcttcagctgctaccaaaagtggaaatctg
tctcttggggctttagaaaaagcaaagaaagcgttacaaatgcagaagcaattgtcagaa
aagctaaaaaagattccacagttaaagaaagttactacaccaagttctgattcaacgctg
tccatgggattaaacaaggaggtagataaagccccagtgtcgagcgtgccccctccgact
gctacactagtatccccacagccaggtaatgcaactgtctctgttggtggcgtgagttca
cttcctggacttgcaaatgtaccaaacattgaggcagtaaagagagcacaggaacttgct
gcgaagatgggatttcaccaggatccagagtttgctcctctcataaacatgttccctggg
cagatgccagtagagattgctattcaacaaaaaccaccaaaagctcctgttctacgttta
gatgcacatggtagagaagtagatgaacatggcaatgtggttaatcagccaaagttgact
aatctcagcaccttgaaggtcaacatcaacaagcagaaaaaggatgcattccaaattctg
aagcctgaattggaggtggatccagaatcaaatcctcactatgatgagagaatgggtatc
aacaaggcgaaactgttgaggccaaagagaatgaattttcaatttgtggaggaaggtgtg
tggtcaaagcaggcagagataattaagttcaagagccaattcggagaagcacaggcaaaa
gagttgaagacaaagcaagcacagctggcaaaagcgaaggccgagcctgatatcaacccg
aatctgatagaagtatccgagagagtgatcatcaaagaaaaaccaaaggacccaatcccc
aaggtcgagtggtgggatgttgtgcttttgccttctgggaactatggtgacatcagcggt
gacagcattactgaagacgaactaaaaatggataaaatcacaatatatgttgagcaccct
ttgccaattgagcccccagctgaacctgccccaccacctccccaacctttaaagttaacg
aagaaagagcagaagaaactgcgtacccaacggcgtctcgcaaaggagaaagatagacag
gagatgatcaggcagggtctgttggaacccccaaagtcgaaggtcaaaatgagtaatctt
atgaaagttcttggatctgaagccacacaagatcctacgaggcttgaaatggaaattagg
agtgcagctgctgagcgtgaacaagcccatgttgataggaacattgcacgtaagctcaca
cctgcggaacgccgtgagaaaaaagagaagaagctctttgatgatccaaacacgcttgag
accatcgtttctgtatataagattaatgatctctcacaccggcaaactcgatttaaggtt
gatgttaatgcccaggagaatcgcctaacagggtgtttggtgataactgatgatataact
gttgtggttgtggaaggtggcaataaatccattaaaagatacggaaagctgatgcttaag
agaataaactgggctgagtctgtcagaaatgaagaagaggatatggatgaagataatgac
aaaccagtgaacaaatgtgtgcttgtgtggcagggcagcgtagctaaatcaagtttcaat
aggtttgctgttcacgagtgcagaactgaagctgctgctaggaaatacttcgctgatgct
ggggttggtcactattgggacctttctgttaattttgcagatgaatcttga
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