Papaver somniferum (opium poppy): 113287210
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Entry
113287210 CDS
T05758
Name
(RefSeq) nuclear-pore anchor-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113287210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113287210
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113287210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR
TPR_MLP1_2
Nucleoprot-TPR
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
113287210
NCBI-ProteinID:
XP_026391679
LinkDB
All DBs
Position
6:27697605..27716048
Genome browser
AA seq
2134 aa
AA seq
DB search
MPLFLTDEEFVRCSNDVSVVVDKADSYIKDLYRQIETLKAQADASSITAEQTCSLLEQKY
VSLTSDFAKLEGEKEQLAVTLEQHISDVAELQSQKHQLHLKSIGRDGDVERLSIEVSELH
KSNRQLLELIEQRDAEITEKNSTLKTYLEKIVNLTDNGSQREARIHDIEAEITRSNAAVA
RVSQEKELTERHNVWLNDELTAMVSSLNELRRSHNEHDSQISSKLANVQREYDECSRSLK
WNEERVRVLEMSLTSMQEELCSCKDAAAMNEERYSAEMSTVTKLVELYKESSEEWSTKAG
ELEGVIRALEIHLDQVENGYKEKLEKEVATRNEIEKEANNLKDKLEKCEAEIESNRKSGE
LSLVPFSTYGDERLICGMEDERSGDNSMIVPKIPAGISGTALAASLLRDGWSLAKMYEKY
QEASDALQHERLGRKQSQAVLENVLFEIEEKAEIILDERAEHERMVEAYSKMNQKLQQSL
SEQVNIEGTIRNLKADLRRQEREYNTAQKEIADLQKQVTVLLKECRDIQLRCGSTSHMDP
DDYVTSTSMKMTFDSDVEKVISERLLTFKDITGLVEQNVQLRSLVRNLSDQNDTRDAELK
ERFEMELRKQADDAASKVTTVLKRVEEQGNMIESLHNSVALYKRLYEEERKRHDTQPHSA
GAVPEHGRKDLMLLFEGSQEASKKAHEQALQRARHLEEEMAKSRSEIISIGLERDKLAME
VNFAQDRLDNFMKEFDHQRDETISVKARNIEFSQLIVEYQRKLRDSSDSVNASEELSRKL
TMDVSILKHEKEMLLNSEKRASEEVLRLSERVHRLQASLDTIQSAEEVREEARSMERRRQ
EEQLNRAEREWTEAKRELQDERDNVRSLTLDREQTIKHTMRQVEEIGKQLADALHAVAAA
EARAAVAEARCSNLEASLKSTQTKELEMDRSSDPSNSSTSEQEPVDLLKAKQEMGKLKEE
AQVNKEHMLQYKSIAQVNEAALKQIESAHEKFKAETEKLKKSLEAEIVSLRERVSELEND
CVSKSKEAVNAVTGKEEALDAALAEISNLKEDISLKTSKMMAMELELSSLKEDLGKENER
WRNAQNNYERQVILQSDTIQELTTTSQALGSLQLEASDLRKLADARKNEIDILRATWETE
KAVLEQLKNEREKNYAEINEQNKILHNHLEALHIKVAEKERSCFGGSSGSTNSAQHGDLD
LQSVVHYLRRSKEIAETEISLLKQENLRLRSQLESALKASETAQSLLQLERANSRSFIFS
DEEFKSLQIQVREINLLRESNIQLREENKNNFEECQKLREITRKARIEAEHLETLLREKQ
ITVESNQKEIEMQKIEKANLEKRLLELLEKGKNIDLEEYERAKDGFQKIQVKLREKEAEL
VESKRLIITRLEHDLANSRSELNEKETRTNDSLQIEAKLRMELHKLKLEHDKLRRLFTIH
KKRNEGWTKEKEELIKEKQSLSKQLEDSKQGKRPIDALAKEKEELINENQSLLKQLEDSK
QGKRPLMDSANDQAMKEKEMKIQILMSTLDKEREEVRKEKIKRVRTEKAVESLVKNVAQE
RKKLVDELEKHKKAKEQLQESTTVSASQLPLENVLDDHMASYQAAVKNLEVGVDSLINEA
PAVDVPPVTTSPAGRQVHPQAMSAPTGAETAAVPSQTRPVDDREKKPISKPNVESRKGGR
RLVRPRLALPEGASGDVEMSEVEAPSNNADSKVVTPSHDCEPEANLAPAIAIQTLVRKRP
ASLASSGTPDEGNIKEEPDSSMPKKSKVFDCLSENIAEIEERIDTKTDDAVDTACEEPVD
SEKDDTVPAAGEETIDSKRDYGDATIEQSAPEEVKDSLLEGESQNEINPLSEELMDDKVQ
DTEEDIEESMRDGEEQDPQQQPIPAEVENDREEGELPSNLADPQNDGGFDMIFEAEESLA
ESVIAPGVEDEEAVPTTEVVPEAVSPEILLYEKNEMGELMEETAEDNDKSNSGNEEEGAV
DDIEHSPKGSFGAGGVETSSSSPTVNLGDPKQGLGDPKQGNTNVSPKAEGGKEDLPGGSV
SPKPEGGKEDLPGVSGNSSTRIINMNERARSGAVLRQAGVVRQAGAASPPVTRGRGRAVL
SAGRTLSTVRGRGVRARGRGGRGNVQAQEDKEQS
NT seq
6405 nt
NT seq
+upstream
nt +downstream
nt
atgccgttattcctcacggatgaggaattcgttcggtgttctaacgatgtttctgtggtt
gtcgataaggcagattcgtatatcaaagatctttatcgacaaatcgagacactaaaagca
caagctgatgcttcatcgataaccgctgaacaaacttgttcacttcttgaacaaaaatat
gtttctcttacttctgattttgccaaacttgaaggggagaaggaacaactggctgttaca
cttgaacaacacatttctgatgttgccgaacttcagtctcagaaacaccaacttcatctt
aaatctattggtagagatggagacgttgagagattatccattgaagtttctgagcttcac
aagtctaatagacagttacttgaattgattgaacaaagagatgcggagattacggagaag
aattccactttaaagacatatctcgaaaaaattgtgaatcttacagacaatggttctcaa
agagaagctcgcattcatgacatcgaagcggaaataacacgttctaatgcagcggtagct
cgtgtatcacaggagaaagaattgactgagaggcacaatgtttggcttaatgacgagtta
acagccatggtgagcagcctgaatgagctacgccgatcgcataacgaacatgactcccag
atttcctccaagcttgccaatgttcaaagggaatatgatgagtgctctagatcattaaag
tggaatgaagaaagagtgagggtgcttgaaatgagtttaacatcaatgcaagaggaatta
tgttcatgcaaagatgctgctgctatgaatgaggagcgctactctgctgaaatgtcaacg
gttacaaagctggttgaactctataaagagagttctgaggaatggtcaacaaaggcaggg
gagctagagggtgtgatcagggcattggagatacatttggatcaagttgaaaatggttat
aaagagaagcttgagaaggaagtagccacaagaaatgagattgaaaaggaagcaaacaac
ttgaaagataaacttgaaaagtgtgaagcagaaattgaaagtaataggaaatctggcgag
ttgagtcttgttccattcagcacttatggtgatgaaagactgatatgtgggatggaggat
gagagaagtggggataacagtatgatcgtccctaaaatcccagcaggcatttcaggaacg
gcattggcggcatcacttttgcgcgacggatggagtctagctaaaatgtatgagaagtat
caagaggccagtgatgcattacaacatgaaaggctaggaagaaagcaatcacaagctgtt
ttggaaaatgtgttgtttgaaattgaggagaaagctgaaatcattttggacgaacgagct
gaacatgaaagaatggttgaagcatattctaagatgaatcaaaagttgcagcagtcgctc
tcggaacaggttaatattgagggcaccattcgaaatttgaaggctgaccttaggagacag
gagcgtgaatataatacagcacagaaagaaatcgctgaccttcagaaacaggtgacggtt
cttctcaaggaatgccgagatattcaacttcgttgtgggtctacaagccatatggatccc
gacgactatgttaccagcacatcgatgaagatgacttttgattctgatgttgaaaaggtc
atttcggaacgcttgttgaccttcaaggatataacagggctggttgagcagaatgtacag
ctccgaagtcttgtacgcaatctctctgatcagaatgatacaagagatgcggagttaaag
gagaggtttgaaatggagttacgtaaacaggctgatgacgctgcatccaaggttactact
gtcttgaaaagggtggaggagcaaggaaacatgatagagtcacttcacaactctgttgca
ttgtataaaagattatatgaagaggaacggaagcggcacgacacacagcctcattctgct
ggggcagttccagaacatggaagaaaagaccttatgctactcttcgaaggttctcaggag
gctagtaagaaagcacatgagcaagctctccaacgtgctagacatcttgaagaagagatg
gctaaatctaggagtgagattatatcaatagggcttgagcgtgataagttagccatggaa
gtgaacttcgcgcaagacagactcgataattttatgaaagagtttgatcatcagagagat
gaaaccatttcagttaaagctagaaatattgagttctctcaactgattgttgaatatcaa
cggaagctacgtgacagttctgattctgtgaatgcctcggaggagctttcacgaaagtta
actatggacgtgtccatcttgaagcatgaaaaggaaatgttgttaaattctgagaaaaga
gcttccgaggaagtgcttaggttgtcagagagagttcaccgtcttcaggcaagtttggat
actattcagagtgcagaggaagtccgtgaggaagctagatcaatggaaagaagaaggcag
gaagagcagttaaaccgtgctgagagggaatggactgaagctaagagagaacttcaagat
gagcgggataatgttcggagtcttacacttgacagggaacagacaataaaacacacaatg
agacaggtcgaggaaataggaaaacaattggctgatgcattgcatgctgttgctgcggct
gaggctagggcagcggtagctgaggctaggtgctcaaatttggaagcaagtcttaaatct
actcaaactaaggaacttgagatggataggagttctgatccttctaattcctcaacaagt
gagcaggagccagttgacctgctcaaagcaaaacaagaaatgggaaaactcaaagaagaa
gcccaagttaacaaagagcacatgcttcagtataaaagcatagcacaagttaacgaagct
gccttgaagcaaatagaatccgcacatgagaaatttaaggctgagactgagaagctaaaa
aagtcgttggaagctgaaattgtctcactgagagaaagggtctctgaacttgaaaatgat
tgtgtttcaaaatccaaagaagctgtcaatgccgtcacagggaaagaagaagcacttgat
gctgcattagctgaaattagtaatctcaaggaagatatatccttaaaaacctctaaaatg
atggcgatggaacttgagttatcctcgttaaaagaagatttggggaaagagaatgaacga
tggcggaatgctcagaataactatgaaagacaggttattctgcagtctgatacaattcaa
gagctgacaacaacatcacaggccttgggctcactgcaactggaagcatctgatttgcgg
aaattggcagatgcccgtaagaatgaaattgacatacttagagcaacctgggaaacagag
aaagcagtattggagcaattaaagaatgaaagggagaagaattacgctgaaattaatgaa
cagaacaagatactgcataatcacctggaggctttacacattaaagtggctgaaaaagag
cgaagttgtttcggtggatcttccggaagcacaaattcagctcaacacggtgatcttgac
ctacaaagtgtggtccattatctccggcggtcgaaagaaatagcggaaacagagatttca
ttgttgaagcaagaaaatctaagactgcggtctcagcttgagtctgccttgaaagcatct
gagacggctcaatcgttgcttcagttggaacgtgccaattctaggtcattcatatttagc
gatgaagagttcaagtcccttcagattcaggtcagagagataaatttgctccgggaaagc
aatattcaacttagagaggaaaacaagaacaactttgaggaatgtcagaaattgcgtgaa
ataactcgaaaggctagaattgaggctgaacatttggaaaccctgctgagggagaagcaa
attacagttgagtccaaccagaaagaaattgaaatgcaaaagatagagaaagctaacttg
gagaagcggcttttggagttactcgagaaggggaagaatattgatttggaggagtacgaa
cgggcgaaggatggctttcagaagatccaggtaaaactaagagagaaagaagcagagctg
gtggaaagtaaaaggcttatcataactcggttggaacatgacctggcaaacagcagatct
gaactaaatgaaaaggagacgagaactaatgatagtcttcagattgaggccaaacttaga
atggaacttcacaagctgaaattggaacatgacaagctcaggagattgtttaccatccac
aagaagaggaacgaaggctggacaaaagaaaaggaagaactgattaaagagaagcaatct
ctttcgaaacagttggaagactctaaacaagggaagagacctattgatgccttggcaaaa
gaaaaggaggagttgattaatgagaatcaatcacttttgaaacagttggaagactctaag
caagggaagagacctttgatggattctgctaatgatcaagcaatgaaagaaaaggaaatg
aagatacagatacttatgtctactctggacaaggaaagagaagaagtgaggaaagaaaaa
ataaagcgtgtcaggaccgagaaggcagttgaaagtcttgttaaaaatgttgctcaggag
agaaaaaaattggtggatgagcttgagaagcacaaaaaagctaaagaacaacttcaagag
agcaccacagtttcggcatcccaactgcccctggagaatgtcttggatgaccatatggct
tcttatcaagcagctgtgaagaacttggaggttggagtagattcacttattaacgaggct
cctgctgtggatgtgccacctgtgacaacttctccagctggtaggcaagttcatcctcag
gctatgagtgccccaactggagcagaaacggctgcagtgccttcacaaactagaccagta
gatgatagggaaaaaaaacccatctccaaacccaacgttgaatcccgtaaaggtggaaga
aggctggtccgacctcgtcttgcacttccagagggggctagcggtgatgttgagatgtct
gaggttgaagcgccctctaataatgctgattcaaaagtagttacgccttcacatgattgt
gagcctgaagcaaatttagctcctgccatcgccattcaaacattagttcgcaaacgacca
gcttcattggcctcatctggaacaccagatgagggtaacattaaagaggagcctgattcc
tctatgccgaagaagtcaaaagtttttgattgtctcagcgagaacattgccgaaattgaa
gagagaattgataccaaaacagatgatgctgttgatactgcttgtgaagagcctgttgat
tccgaaaaggatgacactgtgccggctgcaggcgaagagacaattgattctaaaagggac
tacggagatgctaccatcgaacagtcagctcctgaagaggtgaaggattcattgttagaa
ggtgaatctcagaacgagataaatcctttgtcagaagagttgatggatgataaggttcaa
gacacagaggaggatattgaagaaagtatgagggatggcgaggagcaagatcctcagcag
cagcccattcccgcagaagttgaaaatgatagagaggagggggagttgccttctaatttg
gctgacccccagaatgacggtggttttgatatgattttcgaggcagaagagagtttggcc
gaatctgtgatagctcccggcgtagaggatgaggaggctgtacctaccactgaggtggtt
cctgaggctgtttctcccgaaattttattatatgagaaaaatgaaatgggtgagttaatg
gaagagactgctgaagataatgataagtctaacagcggtaatgaagaggaaggagctgtt
gatgatatcgagcatagccctaaaggttcttttggagcaggtggggttgagacctcttca
tcttccccaactgttaacctaggcgatccaaaacaaggtctaggcgatccaaaacaaggt
aacactaatgtctcacccaaggctgaaggtggaaaggaagatttgccaggtgggtccgtc
tcgccgaagcctgaaggtggaaaagaggatttaccaggtgtatctgggaatagctcgact
agaatcattaacatgaatgagagagctagaagtggggctgtgcttagacaggctggagtg
gtaagacaggctggagccgcatctcctcctgtgactagaggtcggggcagagcagtgctt
agtgctggcaggaccttatctactgttcgtggccgtggcgtgcgtgctcgaggacgaggt
ggacgtggcaatgtgcaagcacaggaggacaaagaacaaagctga
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integrated database retrieval system
