Papaver somniferum (opium poppy): 113287437
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Entry
113287437 CDS
T05758
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113287437
04121 Ubiquitin system [BR:
psom04121
]
113287437
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113287437
Membrane trafficking [BR:
psom04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
113287437
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113287437
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-rbx1
zf-RING_UBOX
zf-RING_11
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Rad50_zn_hook
zf-Nse
CxC4
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
113287437
NCBI-ProteinID:
XP_026391984
LinkDB
All DBs
Position
6:complement(44675307..44677658)
Genome browser
AA seq
327 aa
AA seq
DB search
MSRGGNTHWCYRCRCPVRLRGRDSVCSRCDGGFIQELNEVEGMGQMDILGLDSDDDRDQR
FGLMEAFSAFMRQRLAGRNRDFDIRGRSGVIPENFGSGSGPWLIFSGQIPVRMSENGIEV
LLNGGPGVGITRASGNDYFLGPGLEELIEQLSRNDRQGPPPAARSSIDAMPIVKISQKHL
RTDAHCPVCKDRFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRHELPPQGSSSSSR
SSLSSSGATRSSSFVSNNSGRQNNLENQGRRNPFSFLWPFRSNSNTHSHTNSQSNMHYSE
SGGSSSTTVRENDHHHQMSYSGWPFDY
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggggaggaaacacacattggtgttatagatgtaggtgtcctgttcgactccga
ggaagggattcagtttgctcaagatgtgatggtggttttattcaagagctcaatgaggtg
gaaggcatgggccagatggatatattaggcttagattctgatgatgatcgtgaccagagg
tttggactaatggaagctttttcagcttttatgaggcaacggttagctggacgaaaccgt
gactttgacatcagagggagatctggtgtgatacccgagaatttcggctctggttctggt
ccttggttgatctttagtggccaaattcctgtccggatgtctgaaaatgggattgaggtg
cttcttaatggaggtccaggagttggcataacgcgagctagtgggaatgattactttcta
ggaccaggattggaagaacttatcgaacaactcagtaggaatgatcgtcagggcccaccc
ccagcagctcgttcttcgattgatgcaatgcccattgttaagatatctcagaagcatctg
cgcaccgatgcccactgtccagtttgtaaagatagattcgagttggggtcagaggcccgt
caaatgccgtgtaatcatatttatcattcagattgtattgttccctggctggtccagcac
aactcatgtcccgtttgccgccatgaattgccaccacaaggatccagcagtagttcccgt
agtagtctgagttcaagtggagcaaccagaagcagcagttttgttagtaataacagtgga
agacagaacaatttagaaaatcagggaaggcgcaatcctttctcctttttgtggcctttc
cgctcaaactcaaacacacattcacataccaattcgcagtctaacatgcattatagtgaa
tctggtggaagtagctctacaacggtgcgtgaaaatgatcatcatcatcagatgagttat
tctggatggccttttgattattag
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integrated database retrieval system
