Papaver somniferum (opium poppy): 113287886 Help Entry 113287886         CDS       T05758                                  Name (RefSeq) vacuolar sorting protein 39-like   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism psom  Papaver somniferum (opium poppy) Pathway psom04148   Efferocytosis Brite KEGG Orthology (KO) [BR:psom00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     113287886  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:psom04131]     113287886 Membrane trafficking [BR:psom04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     113287886 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H zf-HC5HC2H_2 DUF2175 Motif Other DBs NCBI-GeneID:  113287886 NCBI-ProteinID:  XP_026392544 LinkDB All DBs Position 1:57646876..57654561 Genome browser AA seq 1014 aa AA seqDB search MVHSAYDSLELLQLKNNSTKIQSVGSYGSKILVGCADGSMLIYVPSSSDPRSPTSSSSTS SDIHNYHHCLELRKDSYVLEKSLTGFSKKPLISMEVSTSRELLVSLSESISFHGLPNLET IAVITKAKGANLFSWDDRRGYLCFSRQKRVCIFRHDGGRGFVEVKEYGVPDVVKSMSWCG ENICLGIRRDYTILNTVSGAFTEVFPSGRTAPPLVVSLPSGELLLGKDNIGVFVDQNGKL LQEGRICWSEAPLAVIIHRPYVIAHLPRHIEIRSLRAPYPLVQTVALRSVHHLLQSNNCV IAALDNSVTGLFPVSIGAQIVQLTASGNFEEALALCKMLPPEDSTLRAAKEESIYIRYGH YLFNNGSYEEAMEQFWAAQVEFTYVLSLYPSIILPKSMLAPDMDKEADVSWDDSYLSRVS SDASEDMDPSSPSYLESERNPVLESKKMSHNTLMALIKYLQRKRCSIVERATVEGTEEIL SDAMGERNMAYDFNKSNISHKGRRNIQVSSGSREMASVLDTALIQALLLTGQSLAALELL KGPNYCDLKITEEFLQQSNYYTALLELYRCNMMHREALELLYQLVEESKADEAQSELKQN FRPDAIIQYLKPLCSTEPMLVLEFSMHVLESCPTEAIDLFLSGNIPADLVNSYLKQHAPK LQATYLELMLSRNESEISGNLQNEMVQIYLSEVLDSYEDLKSQNKWDEQTYSSSRKKLLS ALQSISGYSPEGLLKRLPADALYEERAVLLGKMNQHQLALSLYVHKLHVPELALAYCDRV YETGQKKPSPDAYGNIYLTLLQIYLNPQKSTKDFEKRILNPIPSKNVGTKKVRSLKSNKW NRAVKKIAEIEGAEDIRFSPSSTDSGRSDGDEPILDGTSTIMIDEVLDLLGQRWDRVHGA QALKLLPRETKLQNLLPFLGPLLKKSSEAQRNLSVIKSLRSSENLQVKDELYKHRKTVMK ISNDSMCSLCNKKIGTSVFAVYPNGKTLVHFVCFKDSQSMKTMVKGTPLRKQGY NT seq 3045 nt NT seq  +upstreamnt  +downstreamnt atggtgcacagcgcctacgattcattagagctactacagctcaagaacaactcaacaaag atccaatcagtaggatcatacggttccaaaatcctcgtaggatgtgcagatggttcaatg ttaatttacgttccatcatcatccgatcctcgatctccaacttcatcatcatcaacatca tctgatatacataattatcatcattgcttagaattacggaaagattcatatgtattggag aaatcattgactgggttttctaagaaaccattgatttcaatggaagtttctacatctaga gaacttcttgtttcgttatctgaatcaatttcgtttcatgggttaccaaatcttgagaca attgctgttattactaaagctaaaggagctaatctgtttagttgggatgatcggagaggt tatttgtgtttctctagacagaaaagggtttgcattttcagacatgatgggggccggggt tttgttgaggttaaagagtatggagttccggatgttgtgaaatcaatgtcttggtgtggg gagaatatatgtttgggtattagaagggactacacgatactgaatactgtaagtggtgca tttactgaggtatttccttctgggaggactgcgcctccgcttgtggtttctttaccttca ggggagcttcttctaggaaaggataacattggagtgtttgtggaccaaaatgggaaactt cttcaagaaggcagaatatgttggtctgaagctcctttggctgttatcatccacaggcct tacgtgatagctcatttgccgagacatattgagatacggtcactacgagctccttaccca ttggtgcagacagttgctctccgtagtgttcatcatttactgcaaagcaacaactgtgta attgctgcactagacaactctgtaactggactcttccctgtttctattggtgcacagatt gtacagttaacagcatctggtaactttgaggaagccttagctttgtgtaagatgcttcca ccagaagattctacccttagagccgcaaaggaggagtcaatctacatcagatatggccac taccttttcaacaatggaagctatgaggaagccatggaacagttctgggcagctcaagta gagttcacctacgtactctctttatatccatctattattcttcccaaatccatgttggct ccagatatggacaaggaagctgacgtttcatgggatgattcatatctctcaagagtttca tctgatgcatcagaggatatggacccatcatctccatcatacctagagtctgaaaggaat ccagtgctcgagtctaaaaaaatgagccacaatactctcatggcattgatcaagtacctg cagagaaagagatgcagtatagttgaacgtgccactgttgaggggacagaggagatcctc tcagatgctatgggagagagaaacatggcttatgatttcaataagtccaatatttcacac aagggtcgaaggaacatccaagtcagctcaggatcaagggagatggcatcagtgctggat acagctctaatccaggctttgcttcttactggacaatcgttggctgcattagagctcctg aaaggtcccaactattgtgatctcaaaataaccgaggaatttctgcagcaaagtaactat tatacagcccttttagagctctacaggtgcaacatgatgcaccgtgaagctctcgaactt ttatatcagctagtagaagagtcaaaagctgacgaagcacaatctgaactgaagcaaaac tttagacctgacgcaatcattcaataccttaagcctctttgcagtactgagccgatgctt gttctggaattctcaatgcatgttcttgaaagctgtccaactgaagctatcgatctattt ttatctggaaatattccagctgacttggtcaactcctacttaaaacagcatgcaccaaaa ttgcaagcaacttatttagagcttatgctctcgaggaatgagagtgagatctcgggaaat ctgcagaatgaaatggtgcaaatttatctgtctgaagtacttgattcttatgaggattta aagagtcagaataagtgggatgaacaaacttactcctcgtcacgcaagaagctattgtct gctctacagagtatctcagggtatagccccgagggtttgttaaagcgtctcccagctgat gcattgtatgaggagcgtgcagttttgttggggaaaatgaatcagcaccagctcgcatta tctctatatgttcataagcttcatgttcctgaactggcactagcctattgcgaccgtgtt tatgagactgggcagaagaaaccatctccagatgcatatggaaacatctacctcactctt ttacaaatctatcttaatcctcaaaaatctaccaaggattttgagaagcgaatcctgaac ccaattccatctaagaatgttgggactaagaaggtccggtcactcaaatctaataaatgg aaccgagctgttaaaaaaatcgctgagatagagggtgcagaggatatacgattcagtcca agcagcactgacagtggacgtagcgatggtgatgagccaattcttgatggaacttctaca attatgatcgatgaggtcctggatctgttaggccaaagatgggacagggtccatggagct caggcgctcaaactcttgcctagagaaactaagctacagaacttgcttccatttcttgga ccacttctgaagaaatctagtgaagcacagcgtaacttatcggtgatcaaaagtttgaga tccagtgagaacttacaagtgaaagatgaactctacaagcataggaaaacagtgatgaag atcagtaatgatagcatgtgctctctgtgcaacaaaaagataggaactagcgtctttgca gtctatcctaacggaaaaacacttgtgcattttgtatgctttaaggactcgcaaagtatg aaaactatggtgaaaggtacaccattaaggaagcagggatactag

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