Papaver somniferum (opium poppy): 113288207
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Entry
113288207 CDS
T05758
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113288207
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113288207
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113288207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf_RING_Vps8
zf-ANAPC11
zf-RING_16
Prok-RING_1
zf-RING_Vps41
PHD_NSD
IBR_1
Prok-RING_4
zf-Nse
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
113288207
NCBI-ProteinID:
XP_026392951
LinkDB
All DBs
Position
6:83697912..83698916
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AA seq
167 aa
AA seq
DB search
MGLSNLPAPADGVLCVILVNTAQSISIFKGMLFFILQIIGIHLQSSTESVQNSSGQCDLH
VTSDTLVEQLRKKIPSIPFSSLINGGSSDTRSELHDCTVCLNRFQLDSEVNHLSCGHFFH
KDCLEKWLDYWNITCPLCRTPLLSDEDQSVDDDDDDQETYSCLWNGN
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgggtctatcaaatctaccagctccagcagatggagttctatgtgttatactagtgaac
acagctcaatcaatctcaatatttaagggtatgcttttctttattcttcaaattatagga
attcatttacaatcatcgacggaatcggtccagaattcatccggacagtgcgatttacat
gttacatcggatactttagtagagcagttgagaaaaaagattccttcgattccgtttagt
tctttaattaacggtggtagttccgatactcggtccgaattacacgactgcacggtttgt
ttgaaccggttccaactagattccgaagtgaatcatttgagttgtggtcatttttttcat
aaagattgcttggagaaatggttggattattggaatataacttgtcctctttgcagaaca
cctctgctttcagatgaagatcaatcagttgatgacgacgatgatgatcaagaaacttat
tcttgtctttggaatggaaattga
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integrated database retrieval system
