Papaver somniferum (opium poppy): 113288500
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Entry
113288500 CDS
T05758
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113288500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113288500
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113288500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
Motif
Other DBs
NCBI-GeneID:
113288500
NCBI-ProteinID:
XP_026393335
LinkDB
All DBs
Position
6:complement(96819751..96822910)
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AA seq
388 aa
AA seq
DB search
MDSEQGKIFVGGISWETNEDTLKDHFNKFGEVVETVIMRDRNTGSARGFGFVLFSDPSVA
DKVLLEKHVILGRTVEVKKAVPRGEHNNPYNQKGFNKINGNNGQFRTKKIFVGGLSPSLT
EEEFKAYFEKFGRTTDVVVMYDTTTHRPRGFGFITFDSEEAVENVMQKSFHELNDKVVEV
KRAVPKDGSNSGHNGGYNMRMNGGRGGSAFGGVQGGGIYPPLRPGYGGIYSGYPPQLSGY
ASAGGYPYGASGYLGGYPMGGYGAVGYGGTPIVSPRSPLWNSSSMVGSRRSPMPFGGPAM
YPGYLNGGFVGVPGAGYRGIMGPAAANGKWNMGGDAQMPGAATSPGVGGGKMDDDSSDLA
GSYGAGAGKQNQRGIEGRFRPYTVANSS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggattcagaacaagggaagatttttgtgggtggaatctcatgggaaaccaatgaagat
actttgaaagatcattttaataagtttggtgaagttgtggagactgtgattatgagagat
agaaatacaggtagtgcaagaggttttggatttgttctattctcagatccatctgtagct
gataaagttcttttagaaaaacatgttattcttggaagaacggtagaagtgaaaaaggca
gtgccaagaggtgaacataataacccttacaatcaaaagggttttaataagattaatggt
aataatggtcagtttaggacaaagaagatttttgtaggtggtttatctcctagcttaact
gaggaagaatttaaagcttatttcgagaagtttggtagaactactgatgttgttgttatg
tatgataccacaacacatagacctaggggttttggtttcatcacttttgattctgaggaa
gccgtagagaatgtaatgcagaagagttttcatgagttgaatgacaaagtagttgaggtt
aagagagctgtacctaaagatgggagtaatagtggtcataatggtggttataatatgaga
atgaatggtggaagaggagggtctgcttttggtggtgtacaaggtggtggaatttaccca
ccgttaaggccaggatatgggggaatttactctggatatcctcctcaactttcaggttat
gcttctgctggagggtacccttatggagctagtgggtatcttggaggatatcctatgggt
ggatatggagcagtaggttatggagggaccccaattgtgtctcccaggagtccactatgg
aacagctcttcgatggttggctctcgaaggagtccaatgccttttggaggtcctgcaatg
tatcctggttacttgaatgggggtttcgtgggagtgccaggtgctggttatcgtgggatt
atgggtcctgctgcagcaaatgggaaatggaatatgggtggtgatgctcagatgccaggt
gctgctacgtccccgggagttggtggtggaaagatggatgatgattcttctgatctcgca
ggaagctatggtgctggtgcaggcaaacagaatcaaagaggcattgaggggcgatttagg
ccgtacactgttgccaactccagttga
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