Papaver somniferum (opium poppy): 113288505
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Entry
113288505 CDS
T05758
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113288505
03015 mRNA surveillance pathway
113288505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113288505
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113288505
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113288505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
113288505
NCBI-ProteinID:
XP_026393339
LinkDB
All DBs
Position
6:complement(97085052..97088082)
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AA seq
500 aa
AA seq
DB search
MADDANSSTDTIIEKPSEEKPTEVKPAEVKRAWADEVDDPDEEEQPTSSTSAEKDPELNI
GSLKIDENKNTEKFLDEPEEGNIKAVTGDTLYSTAVTFEDLNLSEEILKGLYVDMKFTRP
SKIQSVSLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVKLRAPQALCICPTRELA
IQNIEVLNKMGKYTGITSFCAIPVDRARDIPINKRSPITDQIVVGTPGTIKKWMSVKKLS
VDDMKILVFDEADHMLAEDGFKDDSLRIMKDIEKSTPHCQVLLFSATFNETVKNFVSRVV
KDGNQMFVRKEELSLDVVKQYKVNCPDEYAKIHVIKDKIFELGEKLGQSIIFVHTRRSAD
VLHKALSDYGWQCTSIHGAIEKDHRDKIVKEFKDGLTQVLISTDLLARGFDQSQVNVVVN
YDLPVKYEYQSEPDYEVYLHRCGRAGRFGRKGAVFNLLCTQKEHMLMGKIENHFQNNIVE
ISDWQNNNEFESALKAAGLI
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgctaacagcagcaccgacaccataattgagaaaccatcagaagagaaa
ccaactgaagtaaaaccagctgaagtaaaacgtgcttgggccgatgaagttgatgacccc
gacgaagaagaacaaccaacttcatcgacatcagctgaaaaagatccagaactgaacatc
ggatcattgaagatcgatgaaaacaagaatactgaaaaatttcttgatgaacctgaagag
ggaaacattaaagcggttactggtgatactttgtattcaacggctgtaacattcgaggat
ttgaatctgtctgaggagatattgaaagggttatatgtcgatatgaagtttacacgacct
agtaagattcaatctgttagtttaccaatgatcttgacaccaccgtataaggatcttata
gctcaagctcataatggttctggtaaaaccacttgttttgtacttggaatgttgagtcgt
gttgatgtgaaactaagagctcctcaagcactttgtatttgccctaccagagaattggca
atccagaatattgaagtccttaataaaatgggaaagtatacggggataacctctttttgt
gcgataccggtggatagagctagggatattccaattaataaacgatctccaattactgat
caaatagttgttggaactcctggtacaatcaagaagtggatgtcagtcaagaaactcagc
gtggacgatatgaagatactagttttcgacgaggctgatcacatgttagctgaggacggt
tttaaagatgattctctcaggattatgaaggatattgaaaaaagcaccccacattgccag
gttcttttgttttctgctacttttaacgagactgttaagaattttgtttcaagagtggtt
aaagatggaaatcagatgtttgttaggaaagaagaactctcactggatgttgtcaaacag
tataaggtgaattgtccagatgaatatgcaaagattcacgtcatcaaggataaaattttt
gaattaggagaaaaattgggacagtcaatcatatttgttcacacaaggaggagtgctgat
gtgttgcataaagcactgtcagattatggttggcagtgcacaagtatacatggtgccatt
gagaaagatcacagagataaaattgtgaaggagtttaaagatgggttgactcaagtcctt
atatcaacggaccttcttgcacgaggttttgatcagtcacaggttaatgtggttgtgaac
tacgaccttccggtgaaatacgagtatcaatcagaaccagattatgaagtgtacttgcat
cgatgcggtagagcaggacgtttcggtcgcaaaggagctgtcttcaatttactgtgtacg
caaaaggagcatatgttgatggggaagattgagaatcatttccagaataatattgtggag
atttctgattggcaaaacaacaatgagttcgagtctgctctgaaagcagctggtttgata
tga
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