Papaver somniferum (opium poppy): 113288609
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Entry
113288609 CDS
T05758
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113288609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113288609
03036 Chromosome and associated proteins [BR:
psom03036
]
113288609
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113288609
Coactivators
SAGA/TFTC/STAGA complex
113288609
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
113288609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
Motif
Other DBs
NCBI-GeneID:
113288609
NCBI-ProteinID:
XP_026393486
LinkDB
All DBs
Position
6:101402499..101408417
Genome browser
AA seq
923 aa
AA seq
DB search
MDPSIMKLLDDDEDETIHSGADVEAFTAALNRDIKGEPSTSEPVDTTGAMSHANNPALSQ
TFEQWQNSVSKENATGQEEGMKNSEPQEEKQSAETTDTMKNGSSADSQQQQNASSLEHNT
LPVKQNQSRTDQLQPQGEQNAPQVKQENVAAVKMPEQSTAQVTEQQVISANQQPYPQLQK
TNNPPVPSAEQANSAQSRNKQVPFGLLLPTIMPHLEKDKAMQLNTLFTKLRNNEINKDGF
VRHMRSIVGDKMLRMAVHAVQTKEVAKEHAARNAQAAQQFQGQRPPTDSSQVSSSTGQLQ
NNSSLSITERNPQNSTVTEHQSASQGMHGNPVPAAPMSTVNQEKEQSVLFRGLTKHQQQH
MHIAQPSYSIYGTNMGNYPAHAFPGAPTGAGLASLKPQTQDPQMRQPPSHHGMGYTQMGG
ASQPMNMMNAPKYDAQTSNGEPKRFHGGPLPHPSSQSTLPHTQWQSSMNKEQKISALPTM
TPVKQESADQTQDQQQQQQRSQTSASMGSASFGVVTRDQGNTASGTEMSSRIPFPASTTT
IQTHSAFVSQVDPAIMINSQVTSTTAPPGAGLNTKTPPKKTLVGQKKPIDALGTPSPVAS
KKQKVSGAFQDQSIEQLNDVTAVSGVDLREEEEQLLSAPKDDGRSSEATRRVVQEEEERL
ILQKNPLQKKLAKIMSKCGIKNISNDVERCLSLCVEERLRGLISNLVRMSKQRVDIEKPR
HRTIITSDVRRQIQLMNRKAKEEWEKKQAEEAEKLRKSNEAEGVTGADGDKDKDEGRSKA
LKANKEEDDKMRTTAANVAARVAVGGDDMLSKWQLMAEQARQKREGGTDVVSASQSGRDS
SRRTLSNPGRALRDNQGAEIRGSSSSVFGGMRKFGRDSVHTKIARSITVKDVIAVLEREP
QMSKSTLIYRLYDKIPGDTTTAE
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggacccttcaatcatgaagctccttgatgatgacgaggatgaaactatacattctggg
gctgacgtagaggcattcactgctgccctaaatagagatatcaaaggagaaccatctact
tctgaaccagtagatactactggagcaatgtctcatgcgaataatccggcgctaagccag
acgtttgaacaatggcaaaattcagttagtaaagaaaatgccacgggtcaagaagaagga
atgaagaattcggaaccgcaagaggagaaacaatcagctgaaactactgatacaatgaaa
aatggaagtagcgctgatagtcagcagcaacaaaatgcgtcatctctggaacacaatacc
ctaccagtaaaacagaatcagtcccgtactgatcaactacaaccacaaggggaacaaaat
gcacctcaggttaagcaagaaaatgtggctgctgtcaagatgcctgaacaaagtactgct
caagtcacagaacagcaggtgatttcagcaaaccagcagccatatcctcagttgcagaaa
acgaataatccacctgtgccatcagcagaacaagcaaatagtgcacagagtaggaacaaa
caggtaccatttggtttgttgcttccaacgattatgccacacctcgaaaaagataaagcc
atgcagcttaatacactgtttacgaaattgaggaataatgaaattaacaaagatggattc
gtaaggcatatgcgaagcattgttggggacaagatgcttagaatggcagttcacgctgta
caaaccaaggaagtggctaaagaacatgctgctcggaatgcacaagcagcccagcaattt
cagggtcaaagacctccgacagactcgtcacaagtttccagttctactggtcagttacag
aacaattcaagcctgtcgatcacagaaaggaaccctcaaaattccacagtgacggaacat
caatcagcatcgcagggaatgcacggaaatccagtgccggctgctcctatgagcacggtt
aaccaagaaaaggagcagtctgttttatttagaggacttacgaagcatcagcaacagcat
atgcatattgcacagccatcatattcaatatatggtactaatatgggtaactaccctgct
catgcatttcctggggcacctaccggtgctggattagcttctttaaaaccccaaactcaa
gatcctcaaatgaggcagcctccatcccatcacggaatgggatatactcaaatgggaggg
gcatctcagcccatgaacatgatgaatgcacccaagtatgacgcccaaacctctaatggt
gaaccaaagagattccatggtgggcctcttcctcatccgtcaagccagtccactttgcca
catactcaatggcaatcctccatgaacaaagagcagaaaattagtgctttgcctacaatg
actcctgtaaaacaggaatcagctgatcagactcaggaccagcaacaacagcagcaaaga
tctcaaacttctgcttccatgggatcagcttcttttggcgtcgtgacacgtgatcaagga
aatacagcctctggaacagaaatgtcatctaggattccttttccagcatctacaactaca
atacaaacacactcggcttttgtttcacaagtggaccctgcaattatgataaattctcaa
gttacctctacaactgctccacccggggctggattaaatacaaagactccgccaaaaaaa
actcttgttggccaaaagaaaccaatcgatgcacttggaactccctcacctgtggcaagt
aaaaagcaaaaggtatctggggcatttcaggatcaaagcattgaacaacttaacgatgtt
actgctgtcagtggagtcgatctcagggaagaggaagagcagctattatctgcacccaaa
gatgatggtaggtcttcagaagcaactcggagggttgttcaagaagaggaagagaggttg
attttgcagaaaaatcccctgcaaaagaaattggcgaagatcatgtcaaaatgtggtata
aagaatataagcaatgatgtggagcgctgcctatcattgtgtgtggaggagagattgcgt
ggattaataagtaatttagtgaggatgtcaaaacagagagttgatattgaaaagcccaga
catagaactatcattacctcagatgttagacgccaaatccaattgatgaaccggaaggcc
aaggaggagtgggagaagaaacaagctgaagaagcagaaaagctcagaaaaagcaacgaa
gctgagggagtcacgggggctgatggtgacaaggacaaggatgaaggccgttctaaggca
ctcaaggcgaacaaagaagaagatgataaaatgcggactacagccgcaaatgttgctgct
cgagttgctgttggaggggatgatatgttatcgaagtggcaacttatggctgagcaagcc
aggcagaagcgtgaaggaggaactgatgtggtgtcagcttctcagtctggtagagattct
agtcgccggactttatctaatcctggacgagctctgagggacaaccaaggagctgaaatc
agaggctcatcttcttcagtatttgggggaatgaggaaattcgggagagattcagttcat
acaaagatagcccggagtataacagttaaggatgtaatcgcagtccttgaaagggagcct
cagatgtcaaagtctacattgatctatcgcctgtatgacaagatacctggtgataccaca
acagctgaataa
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