Papaver somniferum (opium poppy): 113288638 Help Entry 113288638         CDS       T05758                                  Name (RefSeq) vacuolar sorting protein 39-like   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism psom  Papaver somniferum (opium poppy) Pathway psom04148   Efferocytosis Brite KEGG Orthology (KO) [BR:psom00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     113288638  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:psom04131]     113288638 Membrane trafficking [BR:psom04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     113288638 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H TPR_WDR35 zf-HC5HC2H_2 Motif Other DBs NCBI-GeneID:  113288638 NCBI-ProteinID:  XP_026393514 LinkDB All DBs Position 6:102229457..102237167 Genome browser AA seq 1014 aa AA seqDB search MVHSAYDSLELLQLKNNSTKIQSVGSYGSKILVGCADGSMLIYVPSSTDPRSPTSSSSTS SDIHNYHHCLELRKDSYVLEKSLTGFSKKPLISMEVSTSRELLVSLSESISFHGLPNLET IAVITKAKGANLFSWDDRRGYLCFSRQKRVCIFRHDGGRGFVEVKEYGVPDVVKSMSWCG ENICLGIRRDYTILNTVSGAFTEVFPSGRTAPPLVVSLPSGELLLGKDNIGVFVDQNGKL LQEGRICWSEAPLAVLIHRPYVIAHLPRHIEIRSLRAPYPLVQTVALRSVHHLLQSNNCV IAALDNSVTGLFPVSIGAQIVQLTASGNFGEALALCKMLPPEDSTLRAAKEESIHIRYGH YLFNNGSYEEAMEQFWAAQVEFTYVLSLYPSIILPKSMLTPDMDKEADVSWDDSYLSRVS SDASEDMDPTSPSYLESERNPVLESKKMSHNTLMALIKYLQRKRCSIVERATVEGTEEIL SDAMGERNMAYDFDKSNISHKGRRNIQVSSGSREMAAVLDTALIQALLLTGQSLAALELL KGPNYCDLKITEEFLQQSNYYTALLELYRCNMMHREALELLYQLVEESKADEAQSELKQN FRPDTIIQYLKPLCSTEPMLVLEFSMHVLESCPTEAIDLFLSGNIPPDLVNSYLKQHAPK LQATYLELMLSRNESEISGNLQNEMVQIYLSEVLDSYEDLKRQNKWDEQTYSSSRKKLLS ALQSISGYSPEGLLKRLPADALYEERAVLLGKMNQHQLALSLYVHKLHVPELALAYCDRV YETGQKKPSPDAYGNIYLTLLQIYLNPQKSTKDFEKRILNPIPSKNVGTKKVRSLKSNKW NRAVKKIAEIEGAEDIRFSPSSTDSGRSDGDEPILDGTSTIMIDEVLDLLGQRWDRVHGA QALKLLPRETKLQNLLPFLGPLLKKSSEAQRNLSVIKSLRSSENLQVKDELYKHRKTVMK ISNDSMCSLCNKKIGTSVFAVYPNGKTLVHFVCFKDSQSMKTMVKGTPLRKQGY NT seq 3045 nt NT seq  +upstreamnt  +downstreamnt atggtgcacagcgcctacgactcattagagctactacagctcaagaacaactcaacaaag atccaatcagtaggatcatacggttccaaaatcctcgtaggatgtgcagatggttcaatg ttaatttacgttccatcatcaaccgatcctcgatctccaacttcatcatcatcaacatca tctgatatacataattatcatcattgcttagaattacggaaagattcatatgtattggag aaatcattgactgggttttctaagaaaccattgatttcaatggaagtttctacatctaga gaacttcttgtttcgttatctgaatcaatttcgtttcatgggttaccaaatcttgagaca attgctgttattactaaagctaaaggagctaatctgtttagctgggatgatcgtagaggt tatttgtgtttctctagacagaaaagggtttgcattttcagacacgatggggggcgtggt tttgttgaggttaaagagtatggagtcccggatgttgtgaaatcaatgtcttggtgtggg gagaatatatgtttgggtattagaagggactacacaatactgaatacagtaagtggtgca tttactgaggtatttccttctgggaggaccgcgcctccgctagtggtttctttaccttca ggagagcttcttctaggaaaggataacattggagtgtttgtggaccaaaatgggaaactt cttcaagaaggcagaatatgttggtctgaagctcctttggctgttctcatccacaggcct tacgtgatagctcatttgccgagacatattgagatacggtcactacgagctccttaccca ttggtgcagacagttgctctccgtagtgttcatcatctactgcaaagcaacaactgtgta attgctgcactagacaactctgtaactggactcttccctgtttctatcggtgcacagatt gtacagttaacagcatctggtaactttggggaagccctagctttgtgtaagatgcttcca ccagaagattctacccttagagccgcaaaggaggagtcaatccacatcagatatggccac taccttttcaacaatggaagctatgaggaagccatggaacagttctgggcagctcaagta gagttcacctacgtactctctttatatccatctattattcttcccaaatccatgttgact ccagatatggacaaggaagctgacgtttcatgggatgattcatatctctcaagagtttca tctgatgcatcagaggatatggacccaacgtctccatcatacctagagtctgaaaggaat ccagtgctcgagtctaaaaaaatgagccacaatactctcatggcattgatcaagtacctg cagagaaagagatgcagtatagttgagcgtgccactgttgaggggacagaggagattctc tcagatgctatgggagagagaaacatggcttatgatttcgataagtccaatatttcacac aagggtcgaaggaacatccaagtcagctcaggatcaagggagatggcagcagtgctggat acagccctaatccaggctttgcttcttactggacaatctttggctgcattagagctcctg aaaggtcccaactattgtgatctcaaaataaccgaggaatttctgcagcaaagtaactat tatacagcccttttagagctctacaggtgcaacatgatgcaccgtgaagctcttgaactt ttatatcagctagtagaagagtcaaaagctgacgaagcacaatctgaactgaagcaaaac tttagaccagacacaatcattcaataccttaagcctctttgcagtactgagccgatgctt gttctggaattctcaatgcatgttcttgaaagctgtccaactgaagccatcgatctattt ttatctggaaatattccacctgacttggtcaactcctacttaaaacagcatgcaccaaaa ttgcaagcaacttatttagagcttatgctctcgaggaatgagagtgagatctcgggaaat ctgcagaatgaaatggtgcaaatttatctgtctgaagtacttgattcttatgaggattta aagagacagaataagtgggatgaacaaacttactcctcgtcacgcaagaagctattgtct gctctacagagtatctcagggtacagccccgagggtttgttaaagcgtctcccagctgat gcattgtatgaggagcgtgcagttttgttggggaaaatgaatcagcaccagctcgcatta tctctatatgttcataagcttcatgttcctgaactggcactagcctattgcgaccgtgtt tatgagactgggcagaagaaaccatctccagatgcatatggaaacatctacctcactctt ttacaaatctatcttaatcctcaaaaatctactaaggattttgagaagcgaatcctgaac ccaattccatctaagaatgttgggactaagaaggtccggtcactcaaatctaataaatgg aaccgagctgttaaaaaaatcgctgaaatagagggtgcagaggatatacgattcagtcca agcagcactgacagtggacgtagcgatggtgatgagccaattctcgatggaacttctaca attatgatcgatgaggtcctggatctgttaggccaaaggtgggacagggtccatggagct caggcgctcaaactcttgcccagagaaactaagctacagaacttgcttccatttcttgga ccacttctgaagaaatctagtgaagcacagcgtaacttatcggtgatcaaaagtttgaga tccagtgagaacttacaggtgaaagatgaactctacaagcataggaaaacagtgatgaag atcagtaatgatagcatgtgctctttgtgcaacaaaaagataggaaccagcgtctttgcg gtctatccaaacggaaaaacgcttgtgcattttgtatgctttaaggactcacaaagtatg aaaactatggtgaaaggtacaccattaaggaagcagggatactag

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