Papaver somniferum (opium poppy): 113288650
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Entry
113288650 CDS
T05758
Name
(RefSeq) nucleolar protein 6-like isoform X1
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113288650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113288650
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113288650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap_D2
Nrap
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
113288650
NCBI-ProteinID:
XP_026393536
LinkDB
All DBs
Position
6:102737154..102744395
Genome browser
AA seq
1069 aa
AA seq
DB search
MEVVVSSTGAVIDPMDFKVSEVLKEVQLDYESPIITKFIDETISSIKKVINKIPQDLKVG
SDLASGFIRDVNADKFEFSFKKPASIEIGGSYSIQALTKPSTSIDLFISLPKECFHEKDY
LNHRYHAKRCLYLCIIKKYLNASSKIKKIEWSTFQNEARKPVLVVYPVQELDEIIPGFFI
RLIPTATSLFSVPKLNLARSNVRALNKEGMALQATPRYCSSILEDMFLEENAEFVRKTFL
GWKELREALILIKVWARQRTSIYSHDCLNGFLISVILSYLATASGGNRVKKSMKTVQIFR
VTLDFIANSKLWDKGLLLQPHNQSNLSKEERKQYQQLFPVVLCDSSSQLNLAFRITKHGF
SELRDEAAQTLSCIDKYRDGGFEEVFMTKVDFAAKYDYCIRIKADESKEVYASGFCLDEE
CWRTYEEKVHSLLEQALGDRAKSIRVTWRSCPSQWKIEEGFSEFSTSPLVVGILTSAPEK
SFRGVDVGPNAENKEEALKYRKFWGEKAELRRFKDGIIAESTVWECQHWERHLIIKRICD
YILSRHLALPEEKITCVAEQLDFCLLHGGKDSVSFHGSLLAAFEVLSKRLRSIKDIPLSV
SSVQPLDPAFRSTSVFLPAPHPLANEKVKGRTSQLPSTCIQPVEVMIQLEGSGNWPMDDV
AIEKTKHAFLLQIGDSLQKSWGSRCIASEDEVDVLMSGYAFRLRILHERGLSLVRKKVGN
ERMKRITSGDKELFIRGQHSSMINGLLGRYPVYGPVVRLAKRWISAHLFSSFVEEEAVEL
LVAYLFLRHLPFYAPSSRITGFLRFLRLLSNYDWTFSPLIVDINGDMTSKDEKEIYENFM
TSRKAYEESPQNLDRSMFLATSYDKSSEAWTKYSPNSSELKRMVAYAKTGAELLTDLIVH
DQTDAQKTWKSLFRTPLNLYDAVILLHRHKLAFPQRLLSRPETVPGEMIKAKHVAEGKAS
KYFDPFMLRGDLEEMKKNLMVNFDPVRCLVNDLKEEFSETFKLWYDSVGGDAIGLTWDKL
DSKKRAREEMDEDENDKRQDPIDVLRNVGEVGRGFVRSVYLFKSPRLQN
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgttgttagtagtactggtgctgttatcgatcccatggatttcaaagtaagt
gaagtattgaaagaggttcagctcgattacgagtcccctattataaccaaattcatagat
gaaactatttcatccatcaaaaaagttatcaacaaaatacctcaagatttaaaggttggt
tcagatttagcatcaggatttatcagagatgttaatgctgataaattcgagtttagtttc
aagaaaccggcatcgattgaaattggtgggagttattcaatacaagctttaactaagccg
tctactagtattgatctttttattagtttacctaaggaatgttttcatgagaaggattac
ttgaatcatagatatcatgcaaagagatgcctttatttatgtataatcaagaaatattta
aatgcttcttcaaagattaaaaagatagaatggtcgacctttcaaaatgaagcccggaaa
cctgttttggttgtgtatccagttcaggaactcgacgaaattattccaggtttttttatt
aggttgattccgacagctacatctttgttcagtgttccgaaactaaacttggcacgaagt
aatgtacgtgcgcttaataaagaaggaatggctctgcaagctacaccaaggtactgtagt
agcattcttgaagatatgtttttggaggagaacgcggaatttgtccgaaaaacttttttg
ggatggaaggaattgagagaggcactaattttgataaaagtgtgggctaggcagagaact
tctatttattctcatgattgcctaaatggattcttaatctctgtcatactttcatacctt
gccacggcatcaggaggaaatcgtgtcaagaagtcaatgaagacagtgcagatttttcgt
gtcacattggattttattgccaattcaaagttatgggacaagggtcttttgctgcagccc
cataatcaaagtaacctgtcaaaggaggagagaaagcaatatcagcaattgtttcccgta
gttctatgtgattcatcatctcaacttaacctggcattccggatcacaaagcatggcttc
tcagagctccgagatgaggctgcacagacacttagttgtatagacaaatatagagatggt
ggatttgaagaggttttcatgactaaggttgacttcgctgccaaatatgattactgcata
agaataaaagcggacgagagtaaggaggtgtatgcctctggattttgtttagatgaagag
tgctggagaacatacgaggagaaggtgcactctcttctggaacaagcacttggtgacaga
gcaaaatctattcgcgttacttggagaagctgtccctcacagtggaaaattgaagagggc
ttctctgagtttagtactagtcctttggttgtgggaattttaactagcgctcctgagaag
agctttagaggggttgatgttggcccaaatgctgagaacaaagaagaggctctcaagtat
agaaagttttggggagagaaggccgagcttcgtagattcaaagatggcattattgcagaa
agcacagtatgggaatgtcagcattgggaaaggcacctcattatcaaaagaatttgtgat
tacattctttctcgacatcttgccttacccgaagaaaagataacatgcgtcgctgaacaa
cttgacttttgccttcttcatggtggtaaagattcagtctcatttcatggaagccttctt
gcggcttttgaggttttatcaaagcgtttgcgcagtataaaggatattcctttgagtgta
tccagtgtgcagcctttagacccagcctttcgttccacatctgtttttcttcctgcacct
catcctcttgctaacgaaaaggtcaaaggccgaacttcccagctcccctccacttgtata
caaccagtggaagttatgatccagttggagggttcagggaactggccaatggatgatgtt
gccattgagaagactaaacatgcatttcttctacagattggagacagtctccaaaaaagt
tggggttctcgttgtattgcttctgaggatgaggtggatgtcctgatgtctggatacgca
tttcgtctaagaatcctgcacgaaagaggcctgagcttggtgagaaagaaagtgggcaat
gaacggatgaagcggatcacttctggagataaggaactctttatccgtgggcagcattct
agcatgatcaatggtttgcttggtcgttaccctgtatacgggcctgttgtccgccttgca
aaaaggtggatttctgctcatctcttttcctcatttgtggaagaggaggcagtagaattg
ttggttgcatacctctttttgcgacatctaccattctatgctccttcctcccggataact
ggatttttgaggttcttacggttgctgtcaaactatgattggaccttttctcctttaatc
gtagacataaatggtgatatgacttcaaaagatgaaaaagagatatatgagaactttatg
actagcagaaaagcttacgaagaaagtccgcagaatttggatagatcaatgtttttggcc
acgtcatatgacaagtcatccgaagcttggacgaaatattcaccaaactcatctgagctt
aaaaggatggttgcttatgcaaaaacgggtgcggagttattgacagaccttattgttcac
gatcaaactgatgctcaaaaaacatggaagagtttgttccggacgcctttgaacttgtac
gatgctgtaattctcttgcataggcataaactagcttttcctcaacgcttgctttcccgc
cctgaaacggtccccggtgaaatgataaaagcaaagcatgtggctgaaggaaaagctagc
aagtactttgatccttttatgttgcgtggcgacttggaagaaatgaaaaagaatctaatg
gtgaactttgatccagtccgttgccttgtcaacgatctaaaggaagaattctccgaaacg
tttaagttgtggtatgattcagtagggggcgacgctattggtttgacatgggataagctt
gattccaagaagagagcaagagaagaaatggatgaagacgagaacgacaaaagacaggat
ccaatagatgtgctgagaaatgtgggtgaagttggtagaggatttgtaaggagtgtttat
ttattcaaatctcctagactccagaactga
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