Papaver somniferum (opium poppy): 113288747
Help
Entry
113288747 CDS
T05758
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113288747
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113288747
Membrane trafficking [BR:
psom04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
113288747
Exosome [BR:
psom04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113288747
Exosomal proteins of bladder cancer cells
113288747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
TPR_COPA_B
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_At4g14310
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_IFT140_1st
Fis1_TPR_C
Beta-prop_IFT122_1st
Aa-Ago_N
Motif
Other DBs
NCBI-GeneID:
113288747
NCBI-ProteinID:
XP_026393654
LinkDB
All DBs
Position
6:complement(106378716..106382706)
Genome browser
AA seq
1078 aa
AA seq
DB search
MCASFHPKEDLVVSASLDQTVRVWDIGALKKKTVSPADDILRLSQMNTDLFGGVDAIVKY
VLEGHDRGVNWASFHPSLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHA
RQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILALHPEMNLMAAGHDSGMIVFKL
ERERPAFSVSGDTLFYVKDRFLRLYEFSSQKDAQVIPIRRPGSNVLNQGPRTMSYSPTEN
AILICSDVDGGSYELYIVPKDNLGRGDTVQEAKRGLGGSAIFVARNRFAVLDKSNNQVLV
KNLKNEIVKKSALPLAADAIFYAGTGNLLCRSEDRVVIFDLQQRLVLGDLQTPFVKYVIW
SNDLETVALLSKHAIIIASKKLVHRCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNG
DSGIIRTLDVPIYMTKVAGNIIHCLDRDGKSRAIAIDPTEYVFKLALLKKRYDTVMNMIK
NSQLYGQAMISYLQQKGFPEVALHFVKDEKTRFNLALESGNIQVAVASAKEIDEKDHWYK
LGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNIDKLSKMLKIAEVKNDVMGQFHNA
LYLGDIRERVKILESAGQFPLAYITASVHGLQDVAERLAAELGDNVPSLPEGKMSSLLMP
PNPIMCGGDWPLLRVMKGIFEGDNIGRVEEEEEAAVDGDWGADLDIVDPDHHMQNGDVEA
VDEDGVTNEGNDEEGGWDLEDLELPPELDTPKAPGNARSAAFVCPTPGMPVSQIWVQKSS
LAGEHAAAGNFDTAMRLLNRQLGINNFAPLKSMFIDLHSGSHTYVRAFASSPVIALAVER
GWSESASPNVRGPPALVFKFTDLEERLQAGYKLTTNGKFTDALKLFLGILHTIPLIVVES
RREVDEVKELIIITKEYVLGCQMELKRRETKDNPIRQQELAAYFTHCNLKTPHLRLALLN
AMTVCYKGKNFNTAANFARRFLETNPTVENQAKTARQVLQAAERNPKDETQVNYDFRNPF
VVCGATYVPIYRGQKDVACPYCCSRFVPAQDGQLCTVCDLSVVGSDASGLLCSPSQIR
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcatccttccatcctaaagaggatctcgttgtttcggcttccttggatcagaca
gttcgtgtttgggatattggtgcattaaagaaaaagacagtgtcccctgcagatgacatc
ttaaggttaagtcagatgaacactgatttatttggtggagttgatgccattgtcaagtat
gtcttggaaggtcatgatcggggagtcaattgggcttcgtttcatccgagcttgcctctt
attgtttcaggggcagatgatcgtcaagtgaaactatggagaatgaatgatacgaaggct
tgggaagtggatacattaagaggacacatgaataatgtgtcatgtgttatgttccacgct
aggcaggacattattgtgtccaattcagaagacaaaagcatccgtgtgtgggacgttacg
aaacgcactggggttcagacattccgcagagagcatgatcggttctggatactggcattg
catcccgagatgaatcttatggctgctggtcatgatagtggtatgattgtctttaagttg
gaaagagagcgccctgctttttctgtgagcggcgatactctattctatgtcaaagatcgt
tttttgcgcttgtatgagttctcatctcagaaagatgcgcaagttattcccattagaagg
cctggttcaaatgtattaaatcaggggccgagaactatgtcttatagtcctactgaaaac
gccattttaatctgctcggacgtggatggaggttcatatgaattatatatagtccccaaa
gacaacttgggtagaggtgatactgttcaagaggcaaaaagaggactcggaggatcagcg
atatttgtggcccgaaacaggtttgcggttctggataagagcaacaaccaagttttggta
aaaaaccttaaaaatgaaatcgtgaagaagagtgctcttcctttagccgctgatgcgata
ttttatgccggaactgggaatttattgtgcagatcagaggatagagtggttatttttgac
ctccagcagaggctagttcttggagatcttcagaccccttttgttaagtatgtaatatgg
tcaaatgacttggaaactgttgccttgctaagcaaacatgctatcattatagcaagtaag
aagcttgttcatcggtgcacccttcatgagacaatccgtgtaaagagcggtgcgtgggat
gacaacggcgtttttatttacaccacattgaaccatatcaagtattgccttcctaacggt
gatagtggaatcatcaggactcttgacgtcccaatttatatgacaaaggttgctggaaat
atcatccattgcttggatcgagatggaaaaagccgtgctattgctattgatcccacagag
tatgtcttcaaactcgcccttctcaagaagaggtacgacacggttatgaacatgatcaaa
aattcacagctctatggacaggcaatgatatcctatctacagcaaaaaggtttccctgaa
gttgcacttcattttgtgaaagatgaaaaaactcgctttaacctggcattggaaagtggt
aacatccaagtagcagttgcttcagcaaaggagattgatgagaaagaccactggtataag
ttgggagtagaagctcttcgccagggtaatgctggcatcgtggaatatgcatatcaaagg
acaaagaactttgaaaggctatcttttctgtatctcatcacaggtaatattgataagcta
tctaaaatgcttaaaatcgccgaagtcaagaatgatgtgatgggccaattccataatgcc
ctctacctgggtgatattcgtgagcgggtaaaaatcttggaaagtgctggccaattcccc
cttgcttacattacagcttctgttcatgggctgcaagatgttgctgagcggttagcagca
gaattgggagataatgttccctctttgcctgagggaaaaatgtcctcacttctgatgcct
cccaatcccatcatgtgtggtggagattggcccttgttaagggttatgaaaggcattttc
gagggtgataatataggcagagtagaagaggaagaggaagctgcagttgatggtgattgg
ggtgcggacttggatattgttgatcctgatcatcatatgcagaacggggatgttgaagca
gtggatgaagatggggtgacaaatgaaggtaatgatgaggagggaggatgggatcttgag
gaccttgagctcccacctgagcttgatactccaaaggctcccggcaatgctcgctctgct
gcatttgtttgcccgacccctggtatgcctgtgagccagatctgggtccaaaaatcatct
cttgctggtgagcatgctgcagctggcaattttgatactgcgatgcgcttgctgaaccga
caactgggtataaataactttgctcctttgaaatccatgtttattgatctgcacagtgga
agccacacgtatgtccgtgcttttgcttcctctcctgtaattgcgttagctgtagaaaga
gggtggagcgagtctgctagtcctaatgttagggggccacccgccctcgtgtttaaattt
actgatttagaagaacggcttcaggctggttacaaattgaccacaaacgggaagtttacg
gatgctctaaagctcttccttggtatcctgcacaccatccctttgattgttgtggagtcg
aggagggaagttgatgaagtcaaggagttgatcattataaccaaggaatacgtgttgggg
tgtcagatggagcttaagaggagggaaactaaagataatcctatacgccagcaggagcta
gctgcttatttcacccactgcaatcttaagacgcctcatctcagacttgctttgctgaat
gcaatgactgtttgctacaagggaaagaatttcaacacggcagccaactttgccaggcgg
tttttggagaccaacccaacagtggagaatcaagcaaagacagcccgacaagttctgcaa
gctgctgagaggaatccaaaggatgagacccaggtgaactacgactttaggaacccattt
gtggtttgtggggcaacttacgttccgatttatcgcggacagaaagatgttgcatgccca
tattgttgttcacggtttgtgcctgcccaggatggccagctctgtactgtttgtgatctt
tcagttgttggatcagatgcatctggtctgctttgttctccttcccaaattaggtag
DBGET
integrated database retrieval system
