Papaver somniferum (opium poppy): 113288891
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Entry
113288891 CDS
T05758
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2-like isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113288891
Enzymes [BR:
psom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
113288891
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
113288891
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
113288891
NCBI-ProteinID:
XP_026393812
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Position
6:112399054..112403157
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AA seq
642 aa
AA seq
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MKIVTYNINGLRPRISQHGSLLKLLNSLQADIICFQETKLSREEFTADLVMAEGYESFFS
CTSTTGIGRTGYSGVATFCRVNSAFSSKEVALPVAAEEGFTGLLEQSRKRLSAIKKNLPL
EVPAELECLEGISKDELLEVDSEGRCVITDHGHFVLFNIYGPRADHGDKERTQFKLTFYN
ILQKRWEALLSQGKRVIIVGDLNIAPSAIDRCDADPKFEENQFRKWLRSLLVANGGPFYD
VFRSKHPDRTEAYTCWSTQTGAEQFNYGSRIDHILIAGSCLHQDEKMEGHNIIYCHVTEC
DIMTQFKRWKPENASSHRWKGGRNIKLEGSDHAPVYVSFGELPDLPEHNTPSLAARYVPR
IRGFQQTIVTLLSKRQVAAEIKNHGVSQLSYDDVNLKSCGNNSKRSLDDCSVSGSTSIRN
LPSSNQKCDDFTPSISKHIGGTSVEAEEETVTGGAWTKLNPLPPNKMKTSKKARGGDSSQ
RTLSSYFIKKPNLSVVVDHAKSDVLPGQENAAVGQNGSYLLSDEVNSPNGTFVDNEENKS
FPNSQLDLTPSISDADACSSSQKEKSDVALSEWQRIQQLMDKHKQVPLCKGHKEPCVPRV
VKKPGPNLGRKFYVCCRAEGPSSNPETNCGYFEWAASKSRKK
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagttacttataatattaatgggttgagaccaagaatatctcaacatggttct
cttcttaaattgcttaattccctccaagctgatattatttgctttcaggaaacgaagtta
tcaagagaggaatttactgcagatttagttatggctgagggatatgaatcttttttttct
tgtacttctactacgggtataggtcgtactggttactccggtgttgctacattttgtcga
gtaaattcagcattttcaagcaaggaagtggcgttaccagttgcagcagaagaagggttt
acaggtcttttagaacagtctcgaaagcggttgagtgcaataaaaaagaatttgccactt
gaagtgccagcagagttggagtgtttagagggaatatcaaaggacgaacttcttgaggtt
gatagtgagggacgttgtgttatcacagatcatggccattttgttcttttcaatatatat
ggacctcgagctgatcacggtgataaagaaagaacacaatttaagctaacattttacaat
atattacagaaaagatgggaagctttgttaagtcaaggaaagagggtaattattgttggt
gatcttaatattgctccttctgctatagatcgttgcgatgcagacccgaaatttgaggag
aaccagtttcgaaaatggctcagatctttactagtggcaaatggaggacctttttatgac
gtattcagatcaaagcaccctgatcggacagaagcgtacacgtgctggtcaacccaaact
ggggctgaacaattcaattatggttcaagaatcgaccatattcttattgctggttcatgc
ttacatcaagatgagaaaatggaaggacacaacataatatattgccacgttactgagtgt
gacattatgactcagtttaaaaggtggaagcccgagaatgcttctagccacaggtggaaa
ggagggagaaacatcaagttggaaggttctgaccatgctcctgtttatgttagttttggg
gaattgcctgatcttcctgagcacaacaccccatccttagctgcaagatatgttcccaga
atccgtggtttccagcaaacaattgtgacattgctttcaaaaagacaagtagctgctgaa
atcaagaatcatggagtttcacagctatcatatgacgatgttaacttgaaaagttgtggc
aataattctaaaagatcgttagatgattgcagtgtttcaggctcaacgtctatcaggaat
cttcctagttcgaaccaaaagtgtgatgatttcactccaagcataagtaaacatataggt
ggtacttctgttgaagctgaagaagagacagttacaggtggagcctggacaaagttgaat
ccactaccacccaacaagatgaaaactagtaaaaaagccagaggtggagattcttctcag
cgcaccttgagttcatattttataaaaaagcctaatttgagtgtcgtagttgatcatgca
aaatcagatgttttacctggtcaagaaaatgctgcagtcgggcagaatggttcttatctt
ttaagtgatgaagtgaattctcctaatggaacctttgtggataacgaagagaataaaagt
ttcccgaatagtcagctggacttaactccatctataagcgatgccgatgcctgctcttct
tcccaaaaggagaaatctgatgttgcattgtctgagtggcaaaggatacaacagctcatg
gataagcataagcaggtaccactctgcaagggccacaaagaaccttgtgttcctagggtg
gtgaagaaaccaggtccaaacctagggcgcaagttttatgtctgctgccgtgctgagggg
ccttcatctaatccagaaacaaattgtgggtactttgaatgggcagcttcaaaatctagg
aagaaatga
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