Papaver somniferum (opium poppy): 113288998
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Entry
113288998 CDS
T05758
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113288998
Spliceosome [BR:
psom03041
]
Common components
Common spliceosomal components
General mRNP proteins
113288998
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_8
RRM_7
Motif
Other DBs
NCBI-GeneID:
113288998
NCBI-ProteinID:
XP_026393938
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All DBs
Position
6:complement(116858793..116866553)
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AA seq
615 aa
AA seq
DB search
MDFDDAIEYLEKTVEISQAKEKDTVNNGGDDVVKSGGKDRKSSRHRSDENDDDLDSRSKR
ARSGDDTRDHDRRREKSSSRHRSSPDHRSSRDGDRSERDRHRSSREHRDRDRDKDRRAED
RNGKERESSRDRDTDKDHDKVKERDRESEKERDRSRRSTSERRRNDRDKEAERERDREKS
REREREREKSRERERVRERERERERERESRRHKEKKEEVAEPEADPERDQRTVFAYQICL
KADERDVYDFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDSMSVPMAIALSGQPLLGQP
IMVKPSEAEKNLVQSNVAVVGPGGSVGPYSGGARRLYVGNLHFNITEEQLRQVFEPFGAV
ELVQLPLDQETAQCKGFGFVQFARLEDARAAQSLNGQLDIAGRIIKVSAVSDQVGMQEFG
VNAGDFDDDDGGGLTLNSRSRASLMSKLDRSGTTSSLVPVVNGASLALPATSVLGGGPAI
NPLVAAFGQASIPALPGLPGSTLPVTAVSVPPIDSVGVPSECLILKNMFDPTSETEPDFD
LDIKDDVQDEVSKFGTVKHIFVDKDSAGHVYLRFETTTSAMSAQRALHGRWFAGKMITAA
YMLPLNYEAKFPDSK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggactttgatgatgcaattgagtatttagaaaaaactgttgaaatctcacaagccaag
gagaaagatacagtaaataatggtggtgatgatgttgtgaaatcagggggaaaagataga
aagagttctagacacaggagtgatgagaacgacgatgatttagatagtcggtctaaacgt
gcaagatctggagatgacactcgggaccatgatcgacgcagagagaagagttcatcacgc
catcgttcgtctcctgatcacaggtcgtctagagatggagataggagtgaaagggacagg
catagaagcagcagagagcatagggacagagatagagacaaggatagacgtgcagaggat
aggaatggcaaggaaagagaaagcagcagggatagagacacagataaggaccatgataag
gtaaaagagcgcgaccgcgaaagcgagaaagagcgcgatcggtcacgtcgcagcacctct
gaaagacggcgtaatgatcgtgataaggaggctgaacgggaaagggacagagagaagagc
agagaaagagaacgggaaagagagaagagtagagaacgagaaagggtaagagaaagagaa
agagaaagagagagggaacgggaaagcagacgccacaaggagaaaaaggaagaagttgcg
gagcctgaggcagatcctgaaagagatcagagaactgtgttcgcttatcagatttgtttg
aaggcagatgagagagatgtgtacgatttcttttcaagggcgggcaaggtacgggatgtc
cgcctcataatggaccgcaattcaagacgttcaaaaggtgttgggtatatagaattctat
gattcaatgtctgtccctatggctatagcactctctggtcagcctctacttggccaaccg
ataatggttaaaccatcggaggctgaaaagaacttggttcaatcaaatgtagctgtagtg
ggaccaggcggttctgttggaccttattcgggaggagctcggaggctatatgttggcaat
ttgcacttcaacatcacagaagaacaacttcgccaggtgtttgaaccatttggtgctgtg
gagctggtgcaattgcctcttgaccaggagactgcgcagtgcaaagggtttggttttgtc
cagtttgcacgtcttgaagatgctagagctgctcagagtttgaatggacaattagacatt
gcagggaggatcatcaaggtatcagctgtgtcggatcaagttgggatgcaagaatttggc
gttaatgctggtgattttgatgatgatgatggtggaggcttgactttgaattcccgctct
agagccagtctcatgtcgaagttagatcgaagtggcaccacatcaagccttgttcctgtt
gtaaatggagcttcccttgctctaccagcaacatcagttcttggtggtggacctgccatc
aacccactagttgctgcatttggacaagcttctatacctgcactacctggtttaccaggt
tccacccttccggttactgcagtatctgtgcctcctattgattctgtgggtgtcccaagt
gaatgcctaatactgaagaatatgttcgatccgacatctgagactgaacctgattttgat
ttggatattaaagatgacgttcaagatgaagtttcaaagtttgggacagtaaaacatatt
tttgtggacaaggacagtgctgggcatgtatacttgcggtttgaaactacaacatcagcc
atgagtgcgcagcgtgctcttcatgggagatggtttgctgggaagatgataactgcagca
tacatgttacccctgaattacgaggccaagttccccgatagcaaataa
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