Papaver somniferum (opium poppy): 113289057
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Entry
113289057 CDS
T05758
Name
(RefSeq) tRNA pseudouridine synthase A-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113289057
Enzymes [BR:
psom01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
113289057
Transfer RNA biogenesis [BR:
psom03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
113289057
Prokaryotic type
113289057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
VIR_N
Motif
Other DBs
NCBI-GeneID:
113289057
NCBI-ProteinID:
XP_026394011
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All DBs
Position
6:complement(120275789..120277884)
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AA seq
515 aa
AA seq
DB search
MDESVATTTSPSSSSLPPPPPLPPPEEPEPKKLKMSTTTSDDETTNTDPNSIDRKPRYKR
RKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGNPKRFDWARSARTD
KGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLI
PVFALDSSAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKTLEVDGID
VVAQTETTETESGFVLNNDGTENENVELESKDSGVELLVETGGSEEVGSGLVKNSNGDGK
AGKKSVFSYGEKEKEKFNRILSRYVGTHNFHNFTTRTKAEDPAAKRFIISFDANTVVNVE
GVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPTAPEVGLY
LDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQIYPHIGSTELKEGSVGIWLHSLNH
RNYPDLNYLEANKVSKNGLAEETAAVPSVPVESVA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatccgttgctactactacttcaccatcctcatcttcccttccaccaccacca
ccactaccaccaccagaagaacctgaacctaagaaactcaaaatgtccaccaccacctca
gatgatgaaacaaccaacacagacccaaactccatagatcgaaaacctagatacaaacgt
cgcaaaattgcaatattcttagcttactgtggtgttggttatcaaggtatgcagaaaaac
ccaggagctaaaaccattgaagctgatttagaagaagccctttttcaatctggtggtatt
ccagaacctgaccgtggaaaccctaaacgattcgattgggctcgttctgctcgtactgat
aagggtgttagtgctgttggtcaagttgtttctggcaggttctatgttgatcctcctggt
tttattgatcgtcttaattcacatcttcctgatcaaattcgagtgtttgggtttaagcgt
gtgacgaattcgtttagttccaagaagttttgtgatcgaagaaggtatgtttatcttatt
cctgtatttgctttagactcaagtgctcatcctgatagagagagtgtgttagccagttta
ggctctgaaaatgaactttccaagtgcttggagtgtcctgatagaggtagaaaggtgtta
ggtgtaatgggtaaacgcaaaattattgaatcgaaaacattagaagttgatggaattgat
gttgttgctcaaacagaaacaactgaaactgagtctgggtttgttttgaataatgatggt
actgaaaatgagaatgttgagctagaatctaaagattcaggagtggaattattggtggaa
actgggggttccgaggaagtgggttcgggtttggttaaaaatagtaatggggatgggaag
gctgggaaaaagagtgtgttcagctatggtgagaaggagaaagagaagtttaacagaatt
ctgagccgttatgtgggaactcataatttccataacttcacaacaagaacgaaagctgaa
gacccagcagcaaaacgcttcattatatcgtttgacgcgaataccgttgttaatgttgaa
ggagtggattttgttaagtgcgaggttgtgggacagagtttcatgcttcatcagatccga
aagatggttgggcttgcagttgctgtcatgaggactggtgcaccagagtcattgattgat
gtagctctacaaaaggatgtgaattttacagctcctacagctcctgaggttggactatac
cttgatgagtgtttcttcacttcgtataaccagaagtggaaggatacacatgaagagatt
tcaatgaaagattatgctgaagaagctgaggatttcaaaatgaaacaaatatatcctcac
attggatcaacagaactgaaggaaggatctgtaggcatctggctacattctttaaaccac
cgcaattatcctgatttgaattatctagaggccaataaagtcagcaagaatgggctagca
gaagaaactgctgcagttccaagtgttccagttgaaagcgtcgcatga
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