Papaver somniferum (opium poppy): 113289248
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Entry
113289248 CDS
T05758
Name
(RefSeq) SWI/SNF complex subunit SWI3D-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113289248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113289248
03036 Chromosome and associated proteins [BR:
psom03036
]
113289248
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113289248
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113289248
PBAF complex
113289248
GBAF(ncBAF) complex
113289248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
113289248
NCBI-ProteinID:
XP_026394239
LinkDB
All DBs
Position
6:complement(128168394..128173368)
Genome browser
AA seq
1014 aa
AA seq
DB search
MEGGKGKGETNTSATSTTTSNSKQPQQVVGAPQNQQQQPGPRRRNGALKRKAANNSSSAG
PSKRLTRERNNLIPHHILYNNGPITRARQSPNKFGASESSAAVSAGGSGVTSSSTVSTPQ
NLNDPLPNPVSSVDGEIINTIEESNKTKYEELERDLDPVIDAEFEAVRSHGDAAHVIPTH
AGWFSWEKVHPLEEHALQSFFNGESEKRTPDSYMEIRNLIVKKFHEDPKASFDSKDLPEL
SAGELDDRQEVMAFLDHWGLINFKPFPLADASMALPDGDGATKTSSLVEKLYHFEAVESR
PWGSFKPDLAAPVLPPRLYPESFIAEEVRPEGPAVEYHCNSCSGDCSRKRYHCQKQADFD
LCSECYNNGKFDAGMSHADFILMESAEPGVNGGSWTDQETLLLLEALELFGPNWSEIAEH
VATKTKTQCILHFVQMPIEDSFFEVRPAKDDVEANLEANIVTGSSANDLSGLKDAPGTKE
SKVEPDIDSNSVEITPDTTKGKSAIDSDSPAKKDALAETTKDQSVTHEEQPLSPSMDISK
PKDTIEVNLAVETSANIALNALKEAFQTVGSLPEPGEKFSFTEAGNPVMALAAYLAGLVE
FDYAAASTRSSLKIISDKSAAIQLAARHCFVLEDSTDTGNIPSVIESFDLEMSDKVVQKE
EQNIQENSTSVLDGSSTTTTSPKKKSEEAIQKEKESLFSSGDEGKSTLSSAKILDDETVP
QNDTPVVEKEPSDSALPREDTPNVVKESSDSTLPHEEPASTAIESVDVPLPAQATPSSVK
ESSGAVEEASECPETPEAPEAVDKLSNTASLEAKEFKQAAACNLTVENGENTGNDDKKVI
GIKEEKDIGLNKNKDDHNIQRIKRAAITALSAAAVKAKLLAKQEEDEIQQLATFLIDKQL
QKLELKLSFFTEMESVITRVREQMDRSRQKLYQERAQIIASRLGYPASASRTVMPSFPTN
RVAMSYANALPRQQPGTNFQRPQMMASMVRPSGPHLSTPSIPSRTVAGASPNNT
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaggaaaaggtaaaggagaaaccaacacttccgccaccagcaccaccacctca
aattccaaacaaccacaacaagtggtgggagcaccacagaatcaacaacaacaacccggt
cctagaagaagaaatggtgccctaaaacgaaaagcagcaaataattcatcttcagctgga
ccatcaaaacgtttaactagagaaagaaacaacctaattcctcatcatattctttataat
aatggtcctataactcgagctcgtcaatctccaaataaatttggtgcttctgaatcttct
gctgctgtttctgctggtggctccggtgtcacttcgtcttccacagtgtctactccacaa
aatctcaacgaccctttacctaatcctgtgtcatctgttgatggagaaattatcaacacc
attgaagaatctaataagactaaatacgaggaattagaaagagatttagaccctgttatt
gatgcggagtttgaagctgttagatctcatggtgatgctgctcatgttattcctactcat
gctggttggttttcatgggagaaagtccacccacttgaggaacatgcattgcaatctttc
ttcaacggggaatcggagaaacggactcctgattcttatatggaaattaggaatttaatt
gttaaaaaatttcatgaggatccaaaggcttcattcgactcaaaagatttgccggagctc
tctgctggggagttggatgacagacaggaggtgatggcatttttggatcattggggtttg
ataaattttaagccatttccactcgctgatgctagtatggctcttcctgatggcgatgga
gctactaagacatcttcactggttgagaagttgtatcattttgaagcagttgaatctcgt
ccatggggaagttttaagccagatttagctgcacctgtcttgcctccgaggttgtatccg
gaatctttcattgctgaggaggtgaggccagagggacctgctgttgagtaccattgtaac
tcatgctcaggagattgttcgcgcaagcgttaccattgccagaagcaggcagatttcgat
ctatgttctgagtgttataataatgggaagtttgatgctggaatgtcgcacgctgatttc
attctcatggaatctgcagaaccgggtgtaaatggtgggagttggacagatcaggagacc
cttctccttcttgaagccttagaattatttggaccaaactggagtgagattgctgagcat
gttgcaacaaaaactaaaacccaatgtatcttgcattttgttcaaatgccaattgaggat
tccttttttgaagttaggccagctaaggatgatgttgaggctaatctcgaggcgaatata
gttacgggttcaagtgctaatgatttatctggtttgaaagatgctcctgggacaaaggag
agcaaagttgagccagatattgattcaaattctgtggagattactcctgacacaactaag
ggcaaaagtgctatcgattctgattcacctgctaagaaagatgctcttgctgaaacaacc
aaagaccagagtgtgactcatgaagagcaacctttgtctccctcaatggacatttcaaaa
ccgaaggataccattgaagtaaatctcgctgtggaaacaagtgctaacattgcactgaat
gctctgaaggaagcattccagactgttggttctcttccagaacctggagagaagttttca
tttacggaagcagggaatcctgtcatggcattggcagcatatcttgctggtttggtggaa
tttgattatgcagctgcatcaactcgcagttcactaaaaattatatctgacaaatctgca
gccattcagttagccgcaaggcactgttttgtccttgaagattcaacagataccggaaac
atcccttctgtcattgaaagttttgatttggaaatgtctgataaggtggttcagaaagag
gagcaaaacatccaggaaaacagtacatctgttttggatggaagttccacaactacaact
tcccctaaaaagaagtcagaggaagcaattcaaaaagaaaaagagtctttgttttcttca
ggtgatgaaggcaaatctactctgagtagtgcaaaaatattagatgatgaaactgttcct
caaaatgacacaccagtggttgagaaggagcctagtgattcagctttgcctcgtgaggat
acaccaaacgttgtaaaggagtctagtgattctactttgccgcatgaggaaccggcaagt
actgcgatagagtcagttgacgtgccattaccagctcaggctacaccaagctcagtaaag
gaatctagtggtgcagtagaagaggcctctgagtgtcctgagacacctgaggcacctgag
gctgtcgacaaactgtctaatacagcttccttggaagcaaaagagtttaaacaagcagct
gcgtgtaatttaacagtcgagaatggagaaaatacagggaacgacgataaaaaagtgatt
ggtatcaaggaagagaaggatattggcttgaacaaaaacaaagatgaccataatatccaa
agaataaagcgtgctgcaattactgccctgtcagctgccgctgtgaaggcaaagcttctt
gcaaagcaggaagaagatgaaattcaacaactagctacatttttaattgataaacagtta
cagaagttggagctaaagttatctttctttacggagatggaaagtgtgattacaagggtt
agggaacaaatggacagatcgagacaaaaactttaccaagaaagggcccagataattgct
tcacgacttggctatcctgcttctgcatccagaacagtgatgccatcattccctactaac
agagttgcaatgagttacgcaaacgcattgccaagacagcagcccggtacaaactttcaa
aggccacaaatgatggcaagtatggtgagaccatcaggtcctcacctttctaccccatcc
attcctagcaggactgttgcaggtgcttcacctaataatacgtaa
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