Papaver somniferum (opium poppy): 113289253
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Entry
113289253 CDS
T05758
Name
(RefSeq) plant-specific TFIIB-related protein 1-like
KO
K03124
transcription initiation factor TFIIB
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113289253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113289253
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
113289253
Prokaryotic type
Archaeal type
TFB
113289253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
MftB_chaperone
Motif
Other DBs
NCBI-GeneID:
113289253
NCBI-ProteinID:
XP_026394245
LinkDB
All DBs
Position
6:128342282..128344655
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AA seq
551 aa
AA seq
DB search
MKCPYCSGVQGKCTTTTSGRSVTECCTCGRIVEERQYQAHDLFNLRAQDSPLCVVTSDLA
SIIPSPDIVGANKPPNPKINNNSEVEEEGEGEEDEDDDPFEPTGFITAFSTWSLEPSPIT
ARSSISFSGYLAELERSIDSSSTSGSGVVVDNLRAYLQIIDVASILDLEADISDHAFQLF
RDCSLATCLRNRSVEALATAALVQAIREAQEPRTLQEISNAANVPQKEIGKYIKILGEAL
QLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYL
ACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPPNYTPAIPPEKAFPTTLIT
ARSSSASRIDPSEIASFSDKDKQPEVTKPKKSFELLESDHQLSGKEESENKGIDHEPYGA
ANNPAVNRQTTFWQGQVPFGGSDSKQTEAERIRISERGIDMNEIQLSPPEVEHKVVKREP
DATTSSQMLHRFSGPSASSSSSIWHFQTPLSSQPHVQFAQPPPQIGPGFTEIRGAGNQKR
NDKRYGNTEKH
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtccgtattgctcaggtgtgcaagggaagtgtacaacaacaacatcagggcgt
tcagtaacagagtgttgtacatgtggaagaatagtagaagaaagacaatatcaagctcat
gatcttttcaatcttagagctcaagattctccactctgtgtagtcacttctgatcttgct
tcaattatcccatctccagatattgtgggtgccaataaacccccaaaccctaaaatcaac
aataacagtgaagtagaagaggagggggagggggaggaagatgaagatgacgacccattt
gaaccaactggtttcattactgctttctcaacttggtctttagaaccaagcccaattaca
gctaggtcttctatttcattttctggttatcttgctgaacttgaacgttcaattgattct
tcttcaacttctgggtctggtgttgttgttgataatttaagagcttatcttcagataatt
gatgttgcttcaattttagatttggaggctgatatatcagatcatgcttttcaattgttt
agagattgttctttagctacttgtttgagaaatcgaagtgttgaagcacttgctactgct
gcccttgttcaagccataagagaagctcaagaacccagaactctacaggaaatatcaaat
gcagccaatgtcccccagaaggagattggaaagtacattaagatattgggagaggctttg
cagctgagtcagccaattaatagtaattcgatatccgttcacatgccgaggttttgcact
cttctccaactaaacaaatcagctcaggaattggcgactcacattggcgaggttgtaatc
aacaaatgcttctgcacacgtagaaaccctattagcatctctgcagcagctatttatctg
gcctgtcaactagaagacaaacgcaagacccaggctgagatttgcaaagtcacgggacta
accgaggtgacgctgcgcaaagtctacaaggaactattggaaaactgggacgatcttcta
ccacctaactacacacccgccatccctcccgagaaagcattcccaaccactctaattaca
gcacgctcttcatcggcttctagaattgacccatctgagattgcttctttttctgataaa
gataagcaacctgaagttaccaaacctaagaaatcatttgagctcttggagagtgatcat
cagcttagtggcaaagaggagtcagaaaacaaaggcattgaccatgaaccttatggagca
gccaataatcctgcagtgaatcgtcagacaaccttttggcagggtcaggttccatttggt
ggttctgattctaagcaaactgaggcagaaagaattcggatttcagaaagaggtattgac
atgaacgagatccagttgagccctccggaggttgaacataaggtagttaagagagaacca
gatgctaccaccagttcccagatgttgcatcgcttttctggtccctcggcctccagtagc
tccagcatatggcatttccaaacaccactttcatcacagcctcatgttcaatttgcgcag
ccaccaccacagattggaccaggttttacagaaattagaggagctgggaaccaaaagaga
aatgataagcgatatggaaatactgagaagcactaa
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