Papaver somniferum (opium poppy): 113289395
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Entry
113289395 CDS
T05758
Name
(RefSeq) squalene synthase-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00100
Steroid biosynthesis
psom00909
Sesquiterpenoid and triterpenoid biosynthesis
psom01100
Metabolic pathways
psom01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
113289395
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
113289395
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
psom01006
]
113289395
Enzymes [BR:
psom01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
113289395
Prenyltransferases [BR:
psom01006
]
Terpene biosynthesis
Squalene/phytoene synthase
113289395
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Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
PhoU_div
HEPN_SAV2148
Motif
Other DBs
NCBI-GeneID:
113289395
NCBI-ProteinID:
XP_026394430
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Position
1:complement(64305382..64310371)
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AA seq
409 aa
AA seq
DB search
MVSIGAILKHPDEFRPLLKLKLASKHAEKQIPHEPHWHFCYSMLHKVSRSFALVIQQLGP
ELRNAVAIFYLVLRALDTVEDDTSIPNDIKVPILEAFHRHIYDRDWHFACGTNHYKVLMD
EFHHVTTAFLELGKGYQEAIEEITKRMGAGMAKFILKEVETVDEYDEYCHYVAGLVGLGL
SKLFHAANLEDLASDYLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL
EDLKNEENSEKAVQCLNDMVTNALLHMEDCLKYMAALRDPAIFRFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVMDQTKTMSDVYGAFYDFSLMLKSKIDKNDPNATKTLNRI
EAVQKVCRDSGALNHRTSYILGNQSICNSTMIFVVFLVLALMIAFVATK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcataggagcaatattgaaacatccagatgaattccgtccgcttctaaagctg
aaattggcatctaaacatgctgagaagcagatccctcatgaacctcattggcatttttgt
tattctatgcttcataaagtttctcgtagtttcgcccttgttattcaacaattaggtcct
gagcttcgaaacgctgttgccattttttatttggttctcagagcgcttgatactgttgag
gatgacacaagcatacctaatgacataaaggtgcctattctggaagcttttcaccgtcac
atatacgatcgtgattggcacttcgcatgtggtacgaatcactacaaagttctcatggac
gagtttcatcacgttacaactgcatttttagagcttggaaaaggttatcaagaggcaatt
gaagaaataaccaaaagaatgggtgcaggaatggctaaatttatactgaaggaggtggaa
acagttgatgagtacgatgagtattgtcactatgttgctggactcgttgggctagggttg
tcgaaacttttccatgctgccaatttggaggatttggcctctgattacctctcaaattca
atgggcttatttcttcagaaaactaatattattcgagactacctggaggatatcaatgag
atacccaagtcacgcatgttctggcctcgcgaaatttggagtaaatatgtgaacaagctc
gaggacttgaaaaatgaggagaactcggagaaggcagttcagtgcttgaatgatatggtt
accaatgcattactgcacatggaagactgcttaaagtacatggcagcattacgggatccc
gccatattccgattttgtgctattcctcagatcatggcaattggaacacttgctttatgc
tacaacaacattgaagtttttagaggagtagtaaagatgaggcgtggtctgacggctaaa
gttatggaccagacaaaaaccatgtctgatgtctatggtgctttctatgatttttcgcta
atgctgaagagcaagattgacaagaatgatccaaatgccacaaaaacactcaaccgcata
gaagcagtacagaaagtttgcagggattctggtgcgctgaatcacaggacctcgtacata
cttggcaaccagtcaatatgcaattcaactatgatatttgtggtcttccttgtgctggcg
ctcatgattgcgtttgtcgcgaccaagtga
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