Papaver somniferum (opium poppy): 113289519
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Entry
113289519 CDS
T05758
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3 homolog 1-like
KO
K14411
RNA-binding protein Musashi
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113289519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113289519
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113289519
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
113289519
NCBI-ProteinID:
XP_026394572
LinkDB
All DBs
Position
6:complement(139181524..139185152)
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AA seq
397 aa
AA seq
DB search
MENKLVVLGIPWDVDTEGLRDYMSKFGELEDVIVMKERSTGRSRGFGYVTFADVEDAKGA
LESEHFLGNRILEVKVATPKEEMRAPSKKVTRIFVARIPQTVTEAIFRSYFETFGEITDI
YMPKDQGSKAHRGIGFITYETADSVDTLMSETHELEGSTIVVDRATPKDDDSTHMRQPPP
NRVPQGGYGAYNAYITAATRYAALGAPTMYDHPSLGYARGVAEPAVRGMGKKIFVGRLPQ
EASVEDLRHYFGRFGRIIDVYVPKDPKRTGHRGFGFVTFAEDGVAERVSRRTHEICGHQV
AIDSATPLDDAGGTSGGGGGGNLMMQNLEPYGGYVGPMRAYNNYGSLDFDDWGNYGGQTY
GGQSYGGLARAGVNIGGGGGGASSGRPSRMDWRFRPY
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaagctcgtggttcttggtatcccatgggatgttgatactgaaggcttgaga
gactatatgagcaaatttggagagctagaagatgttatagtgatgaaggaacggtcaact
ggacgctctcgtggttttggttatgtaacttttgcggatgttgaggatgccaagggtgcc
ctggaaagtgagcacttccttggtaacagaattctggaagtaaaagttgccacaccaaag
gaagaaatgagagcaccttctaagaaagtaacgaggatttttgtggccagaatcccacag
actgtaacagaagcaatattccgaagttactttgaaacctttggcgagataacagatata
tacatgcccaaggatcaaggctcaaaagctcatcgtgggattgggttcattacttatgaa
actgcagattctgtggacaccttgatgtctgaaactcatgaattggaaggttcaacgata
gttgtggatcgagcaaccccaaaggatgacgactccactcacatgagacaaccaccacca
aacagagtaccacagggtggatatggggcatataatgcatatatcactgcagcaactaga
tacgctgcacttggtgctcctacaatgtatgatcatccaagcttaggatacgcaagaggg
gttgccgaaccagctgtgcggggaatgggcaaaaagatctttgttggtaggcttccacag
gaggcaagcgttgaagatcttcgccattattttggcagatttggtcgtattatagatgtc
tatgtccccaaggacccaaaaagaactggtcatcggggttttggttttgtaacttttgca
gaggatggtgtggcagagcgcgtttctcgaaggactcatgaaatttgtggacaccaggtt
gcaatagattcagcaactccacttgatgatgccggtggtacaagtggaggaggaggagga
gggaacctaatgatgcagaatctagagccttatggtggctatgtaggtccaatgcgtgct
tataacaactatgggagtctggattttgatgattgggggaattacggtggccagacatat
ggtgggcagagttatggtggtctagctcgggctggtgttaatattggtggcggcggcggt
ggtgctagcagtggcagaccttcgagaatggattggaggtttaggccatactaa
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