Papaver somniferum (opium poppy): 113289957
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Entry
113289957 CDS
T05758
Name
(RefSeq) plant-specific TFIIB-related protein PTF2-like isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113289957
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
113289957
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
GDH_C
AKAP28
Cg6151-P
Motif
Other DBs
NCBI-GeneID:
113289957
NCBI-ProteinID:
XP_026395190
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All DBs
Position
6:162659309..162665156
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AA seq
542 aa
AA seq
DB search
MSSCFCKNCKKNTVIRDDITDNLVCETCGLVQSIGDNLVQSFGGLSDFDGTSVRVGDDYT
YKENKIYNAKNDIKEITDRFQFSSRKTIEVEQMIDEITEGEFGAGRWFSILVGACSYVVR
RRDNLPLSMREVASVIACDYHELGRMVLRVVDFLDLKLPEFDIVAFFEFSLKHSHSFAQV
SEERKDEMVKQGTFLVQCLVKWFVTTGRQPNPIVAAIMVFVAELNQVKVQIEDIAKEVHA
GVNTSKRRHGELLQILVKVGQPLPWGKNLTVKNVVNNAPSILRYMELKSRVKPSEKSKNI
NNFRSEFEEIICGCLSKEMEFTEDGSYIGDDLQYYNVEDRSVTLSESVTDLDKLKISQDC
LSKIYTKFSNDGTSPEAMAEKEEEHPRKRRKELGLQSAQDWWRGNSELSEKLSLREVLEK
NVGYNNLPPSFVANKIACQRRREKINAARFRIGETMGKPASSELKNGKEMPYGAKGGNMD
WEDCIIEILLLHRVKEEEIEKGHYSTLLDLHVFDSVNASKMFANAKRQRTEDLVANLING
GG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgcttctgtaagaattgcaaaaagaatacagtgattcgagatgatattacg
gataatttggtatgtgaaacatgtggtcttgtacaatctatcggtgataaccttgtacaa
tcttttggtggcttaagcgattttgatggtacctctgttcgtgttggtgacgattatact
tacaaagagaataaaatttacaatgccaaaaatgacatcaaagagataactgatagattt
cagttttcgtctcgcaaaacgatcgaggtggaacagatgattgatgaaattactgagggg
gaattcggcgcaggcagatggttcagtatccttgtaggtgcatgctcttatgttgtaagg
agacgggacaacttgcctctttcgatgagagaggttgcctcagttatagcttgtgattat
catgagctcggacgaatggttcttcgtgttgttgattttcttgatttaaaattgcccgag
tttgatattgtagcattctttgaattttctctgaagcattctcacagttttgcgcaagtt
tctgaggagaggaaagatgaaatggttaaacagggtacatttctagttcaatgtttagtc
aagtggtttgtgacaactgggagacagcctaatcccattgttgctgctattatggtgttt
gttgcagaattgaatcaagtcaaagttcagattgaagatatagcaaaagaagttcatgct
ggggtaaatacgagtaagagacgtcatggagagcttctgcagattcttgttaaagttggt
caacccttgccttggggtaagaatttaacagttaaaaatgtagtaaataacgcaccttca
atacttcggtacatggagctgaagtctagggtaaaacctagtgagaagagtaagaacata
aataactttagatctgaatttgaagaaattatctgtgggtgtttgagtaaagaaatggaa
ttcaccgaagatggttcatatataggggatgatttacagtactataatgttgaagataga
agtgtaaccttaagtgagagtgttactgatttggacaagctcaaaatctcacaagactgc
ttgtccaagatctatacgaagttctcgaatgatggtacttctccggaagctatggccgag
aaagaagaagaacatcctagaaagaggaggaaagaactaggtcttcaaagtgctcaggat
tggtggcgaggaaattctgaactgagcgaaaagctttcacttagagaagtattggagaag
aatgtaggatataataatttgcctccatcttttgttgctaataaaatagcgtgtcaaaga
cggagagagaagataaatgctgccaggttccggattggtgagactatgggaaaacctgct
tcctctgagctgaaaaatggaaaagagatgccttatggagcaaaaggaggtaatatggat
tgggaggattgtataatagagatcctcctgcttcatcgagttaaagaggaggagatcgag
aaaggtcattatagtacactgcttgacctgcatgtttttgattctgtcaatgctagtaag
atgttcgccaatgcaaaacgacaacgcacagaagatcttgtcgcgaacctgataaatggt
ggaggttga
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