Papaver somniferum (opium poppy): 113289978
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Entry
113289978 CDS
T05758
Name
(RefSeq) twinkle homolog protein, chloroplastic/mitochondrial-like
KO
K17680
twinkle mtDNA helicase [EC:
5.6.2.3
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
psom03029
]
113289978
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
113289978
Mitochondrial biogenesis [BR:
psom03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
113289978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
DnaB_C
Toprim
Toprim_2
AAA_25
Toprim_3
Helic-prim_T7_N
DUF3504
Hepsin-SRCR
AAA_22
AAA_29
Motif
Other DBs
NCBI-GeneID:
113289978
NCBI-ProteinID:
XP_026395223
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Position
6:164166805..164177308
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AA seq
704 aa
AA seq
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MLHLHHHHYHHRLLLLSCSSNIFMASKYFLRPAPHNPPHTLLPTISFFSTNQLRPLQQQQ
QHYNFSPKPISISLNLSNQNSRFSTSAAVSNLVPVEEQSSEEEVTKNRLTLKQQLEKMGI
SCNCKPGTYSRLRCHQCGGGDTMEKSLSVFITADGSTALWNCFRAKCGANGNIKASGNGR
ASSAKVSPRIETSKTKRHITEESIGLEPLSEELIAYFAERMISAETLRRNSVMQKPGDEV
AIAFTYKRNGELISCKYRDINKRFWQEKETEKVLYGLDDIKGATDIIIVEGEIDKLSMEE
AGFRNCVSVPDGAPCKVSDKDIPPEDEDKKYKYLWNCKEYLDKASRIILATDADQPGQAL
AEELARRLGKERCWRVRWPKKNNADVCKDANEVLMCLGSHALRKVIDQAELYPIRGLFTF
RDFFDEIDAYYHCSMGYELGVSTGWRGLDDFYKIVPGELTVVTGVPNSGKSEWIDALLCN
INEKEGWKFALCSMENKVREHARKLLEKHTKRPFFGASYAESVERMSPEELEEGKKWLSN
TFHLIRCEDDSLPSVKWVLELAKAAVLRYGVRGLVIDPYNELDHQRPPNQTETEYVSQML
TKIKRFAQHHSCHVWFVAHPRQLHQWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDAER
GPVDQVEIYVRKVRNKVVGKIGDAKLSYDRVTGTFQDPDDRCRV
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatcttcatcatcaccattatcatcatcgtcttcttcttctctcctgttcctcg
aacatcttcatggcttccaaatacttcttaagacctgcacctcataatcctcctcatact
ctcttaccaaccatatcttttttctctacgaaccaacttcgtccattacagcagcaacaa
caacattataatttctcaccaaaacccatttcaatttctctcaatttatcaaaccaaaac
tctaggttttctacttctgctgctgtctctaatctagtaccagttgaagaacagtctagt
gaggaagaggtaaccaaaaataggttgacattgaagcagcaattagagaaaatggggatt
tcttgtaattgcaagcctggcacttatagtcgtttgagatgtcatcagtgtggtggtgga
gatactatggagaagtccttgtctgttttcattacagctgatggaagtacagctttgtgg
aattgcttcagagcaaaatgtggagcaaatggcaatattaaggcctctggaaatggccgg
gcatcgtctgccaaggtttctccccgtattgaaacaagtaaaaccaaaagacacattaca
gaagagagcattggtctcgaaccattaagtgaggagctaattgcttacttcgctgaaaga
atgatatccgcagaaactcttcggaggaattctgttatgcaaaagcctggtgacgaggtc
gcaatcgcttttacgtataaacgaaatggagagcttataagctgcaagtaccgagacata
aacaaacgtttttggcaggagaaggagactgaaaaagtactttatggactggatgacata
aaaggtgccactgatattataattgttgagggtgaaattgataagctttccatggaagaa
gctgggtttcgtaattgtgtgagtgttcctgatggagcaccttgcaaggtgtctgataaa
gatataccccctgaagatgaggacaaaaagtacaagtacttgtggaattgcaaagaatat
cttgacaaggcatctcgcattattttggcaactgatgcagatcaacctgggcaagcctta
gcagaagaacttgcacgtcgtcttggaaaagaaagatgttggcgagtcagatggccaaag
aaaaataatgctgacgtttgtaaagatgcaaatgaggtgctcatgtgtctgggatcacat
gcactgaggaaagtgattgaccaggctgaattatatcccatacgtggtttgttcaccttc
agagatttcttcgacgagattgatgcatactatcattgcagtatgggctatgaacttgga
gtgtcgactgggtggagaggtctcgatgatttttacaaaattgttcctggagaattgacg
gtagttaccggagttccaaattcaggcaagagtgaatggattgatgctcttttatgcaat
attaatgaaaaagaaggatggaagtttgcactttgctcaatggagaacaaggttcgggag
catgctaggaaacttttggagaagcatacaaaaaggccgttctttggtgctagctacgca
gaatccgttgagcgaatgagtcctgaagagttagaagaagggaagaaatggctcagcaat
acttttcatctcataagatgcgaggatgattcccttccttcagttaaatgggttcttgag
ctagccaaagctgcagtcctcaggtatggggtccgtggacttgtgatcgatccatacaat
gagctagatcatcagcgccctccaaaccagaccgaaacggagtatgtgagtcagatgctt
acgaagatcaaacgtttcgctcagcatcattcatgtcatgtctggtttgtagcgcatcca
agacagttacatcagtgggttggtggaccccctaatctttacgatatcagtggaagtgca
cacttcattaacaaatgtgacaatggaattgttgttcaccgtaaccgggatgctgagcga
ggtccagtggaccaagtagagatatatgttcgcaaagtacggaataaagttgtagggaag
attggggatgctaaattatcttatgacagggtcacgggtacatttcaggatcctgacgac
cgatgccgagtttga
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