KEGG   Papaver somniferum (opium poppy): 113289984
Entry
113289984         CDS       T05758                                 
Name
(RefSeq) RNA-binding protein Y14A-like
  KO
K12876  RNA-binding protein 8A
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03013  Nucleocytoplasmic transport
psom03015  mRNA surveillance pathway
psom03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113289984
  09122 Translation
   03013 Nucleocytoplasmic transport
    113289984
   03015 mRNA surveillance pathway
    113289984
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psom03019]
    113289984
   03041 Spliceosome [BR:psom03041]
    113289984
Messenger RNA biogenesis [BR:psom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     113289984
Spliceosome [BR:psom03041]
 Complex C
  Other components
   EJC/TREX
    113289984
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 113289984
NCBI-ProteinID: XP_026395229
LinkDB
Position
6:complement(164340040..164344638)
AA seq 203 aa
MANNADVEAVDFEPEDDDLMDEGEVEAASPRAPQPKLKSAVIGGGEGGSSSFSAPKKTKG
RGFRDERTEAERTNRFASKDFNSLDSDGGPGAQRSIEGWIILVTGVHEEAQEDDLQTAFG
EFGEIKNLHLNLDRRTGFVKGYALIEYEEFEEAQSAISSMNGVELLTQSISVDWAFSTGP
SKRRNMRRRSPRAHRSRSPRRRY
NT seq 612 nt   +upstreamnt  +downstreamnt
atggccaacaacgcagatgtagaagccgttgatttcgagcctgaggatgacgatctaatg
gacgaaggcgaagttgaagcggcttctcctagggctcctcagcctaagcttaaatcagct
gttattggtggtggagaaggaggttcttcttcattctccgcaccaaagaagactaaaggt
agaggatttcgtgatgagcgcaccgaagctgagcgcaccaaccgatttgcttctaaagat
ttcaattctcttgattctgatggcggtcctggtgcccaaagatccattgaagggtggatt
attttggttactggggtacatgaagaagcacaagaggatgatcttcaaactgcatttggc
gagtttggtgagattaagaatttgcatctgaatcttgatcgccgtactggatttgtcaag
ggctatgcattaatcgagtatgaagagtttgaggaggctcaatctgcaatatcctcaatg
aatggggtcgagcttctaacccagtccatctcagttgactgggccttcagcactggaccc
tccaagcggaggaacatgaggaggagatcaccacgtgcgcaccgttctagaagtccgagg
agaaggtactga

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