Papaver somniferum (opium poppy): 113290104
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Entry
113290104 CDS
T05758
Name
(RefSeq) translation initiation factor IF-2, chloroplastic-like
KO
K02519
translation initiation factor IF-2
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
psom03012
]
113290104
03029 Mitochondrial biogenesis [BR:
psom03029
]
113290104
Translation factors [BR:
psom03012
]
Eukaryotic type
Initiation factors
MTIFs
113290104
Prokaryotic type
113290104
Mitochondrial biogenesis [BR:
psom03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
113290104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
EF-G_D2
MMR_HSR1
GTP_EFTU_D2
Ras
IF2_N
RsgA_GTPase
Roc
Arf
DUF6115
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
113290104
NCBI-ProteinID:
XP_026395423
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All DBs
Position
6:complement(170592455..170599377)
Genome browser
AA seq
1033 aa
AA seq
DB search
MASLASLASLGSVRPSSSCYFEGSSPLVRRISISSKGGVSFLNCPNGQKWNCASVCKCMV
TTANFVAEQGNSSISLDSTLRDENNAADLVLKPAPKPVLKSPPRLEPPVLNAAPPRNSVY
IPPKKPSVDSSSNKSENLEERNKVIESLGEVLEKAEKLETTSTAGRSSSSSSTSAGVGAK
PAAGARTTSSRPVNPVPNRKAKTLKSVWRKGNPVASVQKVVESPKITISEKEVGAKTEEV
VKEAIQASTPLKPPQPPQRVQPTLQSRPAVAPPLPVIKKPVILKDVGAAPRPLVTAEKET
VTAERETGSKTKERKPILIDKFASKKAASDPMMAQAVLAPPKPGKNPASAKFKDEQRKRS
GGPVGSRRRMSSSDIPDDDSSELNLKIKGAARKGRKWSKASRKAARLQAAADAAPVKVEI
LEVEEDGMSTEELSFNLAISEGEILGFMYSKGIKPDGVQKLDRDMVKMVCKEYEVEVIDA
AHVGVEEKARKNEIFDEEDLDKLEDRPPVLTIMGHVDHGKTTLLDYIRKSKVTASEAGGI
TQGIGAYKVLVPVDGKPQPCVFLDTPGHEAFGAMRARGARVTDIAIIVVAADDGVRPQTN
EAIAHAKAAGVPIVVAINKIDKDGASPERVMQELSSIGLMPEDWGGDVPMVQISALKGEN
VDDLLETVMLVAELQELKANPHRNAKGTVIEAGLHKSKGPVATLIVQKGTLKRGDVIVCG
EAFGKARALFDDSGAIVDKAGPSTAVQVLGFSSVPTAGDEFEVVDSLDTAREMAETRAVS
LRDERISSKAGDGMVTLSSLAAAVSAGKQAGIDLHQLNVVMKVDLQGSIEAIRQALQVLP
QDNVTLKFLLQATGDISASDVDLAVAAGKAIIIGFNIKVPNAVKSHADNKGVEIRLYRVI
YELIDDMRKAMEGLLDPVEEQIPIGAAEIRAVFSSGSGRVAGCMITDGKIVKGCGIRILR
NGKTIHVGVVDSLRRVKEVVKEVNAGLECGVGIDDYTDWEAGDTIEAFNSVQKQRSLEEA
SSSMAAAISGEGY
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttggcttccctagctagtttgggaagtgtaagaccaagttcttcttgttat
tttgaaggttcttcgccattagttcgaaggatttcgataagtagtaaagggggtgttagt
tttcttaattgtccaaatggacagaaatggaattgtgcatcagtatgcaaatgtatggtt
acaacagctaatttcgtagcagaacaagggaattcttctatttcattagattctacattg
agagatgagaataatgccgctgaccttgttcttaaacctgctccaaaacctgttttaaaa
tctccgcctagactagaaccaccagttttaaatgctgcaccacctcgcaattcagtatat
ataccgcctaagaaacctagtgtagattcgagtagtaacaaatcagagaatctagaggaa
agaaataaggtgattgaatcacttggggaggttttggaaaaagcagaaaagcttgagact
acttctacagcaggaagatcgagtagtagtagtagtacttctgctggagttggtgctaaa
cctgcagctggtgctagaacgacgagtagtagaccagtgaatccggtgccaaatcgtaag
gcaaaaactttgaagagtgtgtggcgaaaagggaatcccgttgcaagtgtgcaaaaggtt
gtggaatctcctaaaatcactataagtgagaaggaggtaggtgccaagacggaggaggtg
gtgaaggaagcaattcaggcaagtactcctcttaaaccccctcagcctcctcagagagtt
caaccgacgctacaatcaagacccgctgttgctccccctttacctgtaataaagaaacct
gttattctaaaggacgttggagctgctccacgtccactggttactgcggagaaagaaact
gtcactgcagagagagaaactggttcaaaaacaaaagagcgaaagccaatcttgattgac
aagtttgcatccaagaaagccgcatcagatcccatgatggctcaggcagttttagcacct
cccaaacctggaaaaaaccctgcttctgcaaagtttaaagatgagcaacgtaaaagatcc
ggtggtcctgttggatcaaggcgtcgtatgagttcttctgatatacctgatgatgactct
tcagagctaaatctgaaaatcaaaggtgctgcaagaaaaggtaggaaatggagtaaagcc
agccgaaaggcagctcgactccaggcagcagctgacgcagctcctgttaaggtggaaatt
cttgaggtggaggaggatggaatgtcgacagaggaattgtcgtttaacttagctatcagc
gaaggtgaaattcttgggtttatgtactctaaggggattaaaccagatggagtacagaaa
ttggatagagacatggtgaagatggtatgtaaagagtacgaggtggaagtcattgatgca
gctcatgttggagtggaagagaaggcaaggaagaatgaaattttcgacgaggaagacttg
gacaagctagaagataggcctccagttcttactataatgggtcatgtggatcatgggaaa
acaacccttctggattatattcgtaagagcaaggtgactgcatctgaagcaggtggaata
acacaaggaattggggcttataaagtgcttgttcccgtagatggcaagcctcaaccatgt
gttttccttgatacaccaggccatgaggcatttggggcaatgagagcacgtggagcaagg
gtgacagatattgccatcatcgtcgtggctgctgatgatggggtccgccctcaaacaaat
gaggccattgctcatgccaaagcagctggggtgccaattgttgtagctattaataagatt
gacaaggatggagccagtccagagagagtcatgcaagagctctcttcaattggtctaatg
cctgaagattggggcggtgatgtcccgatggttcagataagtgctcttaaaggggagaat
gtggatgatttgctggagactgtgatgcttgttgccgagctacaagaattgaaggctaac
cctcacagaaacgcgaagggaacagtcattgaggccggtcttcataaatcaaaaggacct
gtagctacacttattgttcagaaaggaaccctcaaaaggggggatgttatagtttgtggt
gaagcctttggaaaggcaagggccttgtttgatgacagtggagctatagttgacaaagca
ggtccttctactgctgtccaggtccttggttttagtagtgttcctactgctggagatgag
tttgaggttgttgactcacttgatactgctcgtgaaatggcagagacacgtgcagtatca
ttaagagatgaaaggatatcatcaaaagcaggtgatgggatggttacactttcttcatta
gctgccgcagtttcagctggaaagcaggctggaatagatttgcaccagctgaatgttgtg
atgaaggttgatttacagggttccattgaggccatcagacaagctcttcaagtgctccct
caggataatgtaactttaaagtttcttctgcaagcaacaggggatataagtgcaagtgat
gttgatcttgctgtggcagctggtaaagccattataataggtttcaatatcaaagtgcca
aatgctgtcaagagccatgcagacaacaaaggtgtagagattcggttgtacagagtcatt
tatgagcttatcgatgacatgaggaaagcaatggaaggacttcttgatcccgttgaggaa
caaatacccattggagctgctgaaatccgtgctgtcttcagcagcggcagtggtcgtgtt
gctggatgcatgataacagatggaaaaattgtgaaaggctgtggaattcggatccttcgg
aatgggaaaacaatccacgttggtgttgttgattctttgagacgagtgaaggaagttgtg
aaagaggtaaacgccggactagagtgtggtgttgggattgacgattacaccgattgggag
gcaggtgataccatagaggcctttaactctgttcagaaacaacgatcacttgaagaagca
tcgtcttccatggcagctgcaatttcaggtgaaggttactag
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