Papaver somniferum (opium poppy): 113290118
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Entry
113290118 CDS
T05758
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03420
Nucleotide excision repair
psom04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113290118
09124 Replication and repair
03420 Nucleotide excision repair
113290118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113290118
03400 DNA repair and recombination proteins [BR:
psom03400
]
113290118
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
113290118
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
113290118
TCR (transcription coupled repair) factors
Cul4-CSA complex
113290118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
113290118
NCBI-ProteinID:
XP_026395440
LinkDB
All DBs
Position
6:171602799..171612627
Genome browser
AA seq
1089 aa
AA seq
DB search
MSLWNYVVTAHKPTNVTHSCVGNFTSPHELNLIVAKCTRIEIHVINAQGLQAVLDVPIYG
RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELVTRAAGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDSRGQLKEAFNIRLEELQVLDIKFLFGCSKPTIVVL
YQDNKDARHVKTYEVALKEKDFSEGPWSQNNLDNGAGLLIPVPMPLGGVIIIGEETIVYC
SAVVFKAIPTRPSITRAYGRVDADGSRYLLSDHAGLLHLLVITHEKERVTGLKIELLGET
SIASTISYLDNAIVYVGSSFGDSQLVKLNLHPDAKGSYVEVVERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRASTDDPYDTFLVVS
FISDTRILAMNLDDELEETEIEGFDSEVQTLFCHDAVNNQLVQVTASSVRLVSSTSRDLL
DEWKAPVGFSVNVATANSSQVLLATGGGHLVYLEIGDGKLAEAKYAQLEYEVSCLDINPI
GENPNFSQLAAVGMWTDMSVRIFSLPGLDLIRKEQLGGEIIPRSVLLCAFEGVSYLLCAL
GDGHLFNFLLNVNTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSYMCPFNTAPFPDSLAIAKEGELTIGTIDDIQKLHIRTIPLGEHAKRICH
QEQSRTFAICTMKYCQSSNEDSEMHFVRLLDDQTFDIISFYPLDTYEYGCSILSCSFADD
TNFYYCVGTAYVLPEESEPTKGRILVFVVEDGKLQLIAEKETKGSVYSLNSFNGKLLAAI
NQKIQLYKWMLRDDGSRELQLECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMTAVEILDDDIYLGAENNFNLFSVRKNSEGTTDEERARLESVGEYHL
GESVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPQEHYLFLEKLQSNLVKV
IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRNRMEEISAAMSVSVEELCK
RVEEMTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatggaattacgtagtaacagctcacaaacctaccaatgttactcattcatgt
gtaggaaatttcacttctcctcacgaacttaatctcatcgttgcgaaatgtactcgtatt
gagattcatgtcattaatgctcaagggttgcaggctgtactggatgtgccaatatatgga
agaattgcaacactcgagctttttcgccctcatggagaagctcaagactttttatttatt
gctaccgagagatataagttttgcgttttacagtgggatgcagagtcatctgaacttgtg
accagagcagcaggtgatgtctcggatcgcattggtcgtcctaccgacaatgggcagatt
ggtatcatagatcctgattgtagattaatcggtctgcatctttatgatggcttattcaag
gttatacccttcgatagtagagggcagctgaaggaagcattcaacattaggcttgaggag
cttcaagttttggatataaaattcctcttcgggtgttcaaaacccacaattgttgttctt
taccaggacaataaagatgcgagacatgttaaaacatatgaggttgcactcaaggaaaaa
gacttctcggagggtccatggtcgcagaataatcttgataatggggctggcttgttaatt
cccgtccctatgcctcttgggggtgttatcattattggagaggaaacaattgtttattgt
agtgccgtcgtatttaaagcaatcccgaccagaccttcgattacaagggcctatggaagg
gttgatgcagatggctctcgttacttactcagtgatcatgcaggtcttcttcacttactt
gtgattacccatgagaaagaaagagtaactggtctgaaaattgagctcttgggtgagaca
tcaattgcatctacaatatcttaccttgacaatgcgatcgtatacgttggctctagcttt
ggagactcgcagcttgtaaaactgaatctccaccctgatgcaaaaggctcatatgtagaa
gtcgtagaaagatatgtcaatttgggacctatcgtggatttctgtgtggttgacctagag
aggcagggccaaggtcaggtcgtaacttgttctggagcatacaaagatggttctctacga
atagttcgaaatggaatagggatcaatgaacaggcatcagtagaacttcaaggcatcaaa
ggaatgtggtctttaagagcatctactgacgatccatatgatacctttttggttgtgagt
tttatcagtgacactcgaatattggcaatgaatttggatgatgagttagaggaaacagag
atagagggttttgattcagaggttcaaactctgttctgtcatgatgctgtaaacaaccag
cttgtacaagttactgcaagctctgtacggcttgtcagctctacatcacgtgatctcctt
gatgaatggaaagctccagtgggattttcggttaatgttgccacagcaaattccagtcag
gttttattggcgactggaggtggccacctagtttacctagaaattggtgatggtaaattg
gctgaagccaaatatgcgcagttggaatatgaggtgtcctgccttgacataaacccgatt
ggtgaaaaccctaacttcagtcagctagcagcggttggtatgtggacagatatgagtgtc
cggatattttcccttcctggccttgatctcataagaaaggagcaactgggaggagagatt
attcctcgctctgttcttctgtgcgcctttgaaggggtctcatacttgttatgcgccctt
ggagacggacacctgtttaattttctgttgaacgtgaacactggcgaattaacagatagg
aaaaaggtctcacttggaactcagccaataacgctacgtacgttttcttctaagaacaca
acacatgtgtttgctgcatcagatagacctactgttatatacagtagtaacaaaaagtta
ctctacagtaatgtgaacttgaaagaagtaagctatatgtgtccattcaacactgctcct
ttcccagacagccttgctattgcaaaagaaggtgaacttactattgggactatcgacgat
attcaaaagctgcatatacgtacaattcctctgggagagcatgcaaagcgcatctgtcat
caagagcaatctcggacctttgcgatctgcactatgaaatactgccaatcgagcaatgaa
gattctgaaatgcactttgttcgattgttagatgatcaaacatttgacatcatatctttt
tatccgcttgatacgtatgagtatggttgttctatcctcagctgttcgtttgcagatgac
actaatttttattactgcgtgggaactgcatatgttttgcccgaggaaagtgagccaacc
aagggtcggatactagtttttgtagttgaagatgggaaactacagctaatcgcagagaag
gaaacaaagggttcagtttactctttaaattcattcaatgggaaacttcttgctgctatt
aatcaaaagattcaactgtataaatggatgctgcgggatgatggctcccgtgagttgcag
ttggaatgtggtcatcatggacacattctcgcgctctatgtccaaacccgtggagatttc
attgttgttggtgatttgatgaaatcaatctcgttgctaatatataagcatgaagaagga
gctatcgaggagcgggctcgtgactacaatgcaaactggatgaccgcagtcgagatcctc
gatgacgatatctatcttggagctgagaacaatttcaacttattttctgtcaggaagaat
agtgagggtacaactgatgaagaacgagcgaggctcgagtctgttggtgaataccacctt
ggtgaatccgtgaaccggttcagacacggttcgcttgttatgcgtctccctgattccgac
gtgggtcagattcctacagtcatcttcggcactgtcaatggcgtgattggagttattgca
tcactcccacaggagcattacctatttctagaaaagttacaatcgaacttggtcaaggtc
ataaagggtgttgggggattgaaccatgaacaatggcgatctttcaacaatgaaaagaag
actgtagatgccaagaacttcttggacggggatttgattgaatcattccttgatctaagc
cggaaccgaatggaagagatctcagcagccatgagtgtttcagttgaggagctctgtaag
agagtagaagaaatgacaaggttgcattga
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integrated database retrieval system